KEGG   Variovorax sp. EBFNA2: RZE79_04105
Entry
RZE79_04105       CDS       T10564                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vae  Variovorax sp. EBFNA2
Pathway
vae00300  Lysine biosynthesis
vae00470  D-Amino acid metabolism
vae01100  Metabolic pathways
vae01110  Biosynthesis of secondary metabolites
vae01120  Microbial metabolism in diverse environments
vae01230  Biosynthesis of amino acids
Module
vae_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vae00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RZE79_04105 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RZE79_04105 (dapF)
Enzymes [BR:vae01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     RZE79_04105 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: WPG38525
LinkDB
Position
915253..916137
AA seq 294 aa
MRIRFTKMQGAGNDFVVLDETRGTLGLSAAQYRFLADRHFGVGADQILTVRPSPAAGIDF
QYVIHNADGGEVEQCGNGARCFMRFVSEHGLTDKKDVRVQTLAGVIEPRMGDDGRVTVDM
GAPVFEPARVPFDTAGLDPQPEGAWQKWHLALGTRAGSAIVSVAVLSMGNPHAVQVVDNV
DTAPVAEQGPQIEHHPRFPQRVNAGFMQVLDRSNIKLRVFERGAGETLACGTGACAAVVA
GIRLGLLDSRVDVQTHGGILTIEWQGDGRPVLMTGPATTVFEGEIDVPDISEQP
NT seq 885 nt   +upstreamnt  +downstreamnt
atgcgaatccgctttaccaagatgcagggagccggcaacgatttcgtcgtgctcgacgaa
acgcgcggcacgctgggcctcagcgccgcgcagtaccgcttcctggccgaccgccatttc
ggcgtcggcgccgaccagatcctcacggtgcgcccgtcgcccgctgcaggcatcgacttc
cagtacgtgatccacaacgccgacggcggcgaggtggagcagtgcggcaacggggcgcgc
tgtttcatgcgcttcgtgagcgagcacggcctgaccgacaagaaagacgtgcgcgtgcag
acgctggccggcgtgatcgagccgcgcatgggcgacgacggccgcgtgacggtcgacatg
ggcgccccggtcttcgaaccggcgcgcgtgcccttcgacacggccgggctcgacccgcag
cccgaaggcgcgtggcagaagtggcacctcgccttgggcacccgggccggcagcgctatc
gtttcggtcgctgtgctgtcgatgggcaacccgcacgcggtgcaggtggtcgacaacgtc
gacacggcgccggtggccgagcagggcccgcagatcgagcaccacccgcgttttccgcag
cgcgtgaacgcaggcttcatgcaggttctcgaccggtcgaatatcaagctgcgggtgttc
gagcgcggcgccggcgaaacgctggcctgcggcacgggcgcctgcgcggcggtggtggcg
ggcattcgcctggggctgctggactcccgcgtcgacgtgcagacgcacggcggcattctc
acgatcgagtggcagggcgacggccggccggtgctcatgacaggaccggccacgacggtg
ttcgagggcgagatcgacgtgcccgacatttcggaacagccatga

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