Variovorax sp. EBFNA2: RZE79_06520
Help
Entry
RZE79_06520 CDS
T10564
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RZE79_06520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vae03019
]
RZE79_06520
Messenger RNA biogenesis [BR:
vae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RZE79_06520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
WPG40672
LinkDB
All DBs
Position
complement(1446704..1447372)
Genome browser
AA seq
222 aa
AA seq
DB search
MLDRDGFRPNVGIILLNQRNQVFWGKRIRTHSWQFPQGGIDRGESPEQAMFRELHEEVGL
HPEHVRIVARTRDWLRYEVPDRFIRRDARGHYKGQKQIWYLLQLVGHDWDLNLRATDHPE
FDAWRWHDYWVPLDVVVEFKRGVYEMALTELARYLPRQDFRNRFLRSNVRAREFERHTLD
HGAPAGLDLPPGGSFDPHPDIPSASDEPPPKNSAPSSFPTPR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccgggacggcttcaggcccaacgtcggcatcatcctgctcaaccagagaaac
caggttttctggggcaagcgcatacgcacgcattcctggcagtttccgcaaggcggcatc
gaccgtggcgaaagtcccgagcaagccatgttccgggaactgcacgaggaagtcgggctc
catccggagcatgtgcgcatcgtggcccgtacccgcgactggttgcgctacgaggtgccg
gatcggttcatccgccgtgacgcacggggccactacaaaggccagaagcagatctggtat
ctgctgcaacttgtcggccacgactgggatctcaacctgcgtgccaccgaccatcccgaa
ttcgacgcttggcgctggcatgactactgggtcccgctcgacgtggtcgtcgagttcaag
cgcggcgtctacgagatggcgcttaccgagcttgctcgctacctgccccggcaggatttc
cgcaaccgcttcctgcgcagcaacgtgcgcgcccgagaattcgagcgccacacgctggac
catggagcacctgcgggcctcgacctgccgcccggcggcagcttcgatccgcatcccgac
attccttctgcgagcgatgaacctcctcccaagaacagcgcgccttcttctttcccgacg
ccacgctga
DBGET
integrated database retrieval system
