Variovorax sp. EBFNA2: RZE79_08665
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Entry
RZE79_08665 CDS
T10564
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae03420
Nucleotide excision repair
vae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RZE79_08665
03430 Mismatch repair
RZE79_08665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vae03400
]
RZE79_08665
Enzymes [BR:
vae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RZE79_08665
DNA repair and recombination proteins [BR:
vae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RZE79_08665
MMR (mismatch excision repair)
Other MMR factors
RZE79_08665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WPG39395
LinkDB
All DBs
Position
1880169..1882619
Genome browser
AA seq
816 aa
AA seq
DB search
MLPHDLFSGASAADAGGPASPLLNNLNAEQLAAVTLPAGNALILAGAGSGKTRVLTTRIA
WLLQTGQVSAGGILAVTFTNKAAKEMMTRLTSMLPVNVRGMWIGTFHGLCNRLLRAHWKL
ANLPSTFQILDTQDQLSAIKRLMKQFNVDDERFPAKQTQWFIAGAKEDGLRPGDMQARSD
DDRKKVELYQLYEEQCQREGVVDFGELMLRSYELLRDNDPVREHYQRRFRHIMVDEFQDT
NRLQYAWLKMLSGHTAAGGHFTPGEHNSVIAVGDDDQSIYAFRGARVGNMTDFVREFNVR
HQIILEQNYRSYSNILDSANELISHNKKRLGKNLRTEQGPGEPVRVYESPTDLAEAQWMV
EEMRQLARDGFDRKEMAVLYRSNAQSRVIETALFNASVPYRVYGGLRFFERAEIKHALAY
LRLLENKDDDTSFLRVVNFPPRGIGARTLESLQDASRAAGRSLHDAVSAVGGKAGSNLTA
FVAKIDVLREQTQGVSLREIIELVLDHSGLVEHYKADREGADRLENLDELVNAAESFVTQ
EGFGRDAVALPVDELRQSLASQGIDLTRPVLDEPLAPDAETGETLSPLAAFLTHAALESG
DNQAQAGQDAVQLMTVHAAKGLEFDCVFITGMEEGLFPHENSMSDFESLEEERRLMYVAI
TRARKRLYLSHSQTRMLHGQTRYNVKSRFFDELPESALKWLTPKNQGFAPSAFGYGGGYG
STRGGAGGYGGGGGGGNRYGGGSSAGKDTFASPPVPPQKTAPSHGLRSGMQVFHNKFGEG
TVTALEGTGDDARAQVKFARHGVKWLALSVAKLTPV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgctccctcacgacctgttttccggcgcgtccgcagccgatgcgggcggccctgcctcg
ccgttgctgaacaacctcaacgccgagcagcttgctgccgtcacgctgcccgcgggcaac
gcgctcatcctcgccggtgccggctccggcaagacgcgggtgctcaccacccgcatcgcg
tggctgttgcagacggggcaggtgtccgccggcggcatcctggccgtcaccttcaccaac
aaggccgccaaggaaatgatgacgcggctgacctcgatgctgcccgtcaacgtgcgcggc
atgtggatcggcaccttccacggcttgtgcaaccgcctgctgcgcgcgcactggaagctg
gccaacctgccctcgaccttccagatcctcgacacgcaagaccagctctcggccatcaag
cgcctgatgaagcagttcaacgtcgacgacgagcgctttccggccaagcagacgcagtgg
ttcatcgccggcgccaaggaagacggcctgcgccccggtgacatgcaagcgcgcagcgac
gacgaccgcaagaaggtcgagctctaccagctgtacgaagagcagtgccagcgcgaaggc
gtggtcgacttcggcgagctgatgctgcgcagctacgagctgctgcgcgacaacgacccg
gtgcgcgagcactaccagcggcgctttcgccacatcatggtcgacgagttccaggacacc
aaccgcctgcagtacgcatggctgaagatgctctcgggccacacggcggccggcggccac
ttcacgccgggcgagcacaacagcgtgatcgccgtgggcgacgacgaccagagcatctac
gccttccgcggtgcgcgggtgggcaacatgaccgacttcgtgcgcgagttcaatgtgcgc
caccagatcatcctggagcagaactaccgcagctacagcaacatcctcgattcggccaac
gagctcatcagccacaacaagaagcgcctgggcaagaacctgcgcaccgagcagggcccg
ggcgaaccggtgcgggtgtacgaatcgcccaccgacctcgccgaggcgcagtggatggtc
gaagagatgcgccagctggcgcgcgacggcttcgaccgcaaggaaatggccgtgctctat
cgcagcaacgcgcagagccgggtgattgaaacggcgctgttcaacgcctcggtgccatac
cgcgtgtacggcgggctgcgcttcttcgagcgcgccgaaatcaagcacgcgctggcctac
ctgcgcctgctcgagaacaaggacgacgacaccagcttcctgcgcgtcgtcaactttccg
ccgcgcggcatcggcgcgcgcacgctcgaaagcctgcaggacgcgtcacgcgccgccggg
cgctcgctgcacgacgcggtgagcgccgtcggcggcaaggccggctcgaacctcacggcc
ttcgtcgccaagatcgacgtgctgcgggagcagacgcaaggcgtgagcctgcgcgagatc
atcgagctggtgctcgaccacagcggccttgtcgaacactacaaggccgaccgcgaaggc
gctgaccgcctcgaaaacttggacgaactcgtgaacgcggccgaaagcttcgtcacgcag
gaaggtttcggccgcgatgccgtggcgctgccggtcgacgagttgcgccagtcgctcgcg
agccagggcatcgacctgactcgccccgtgctcgacgagccgctggcgcccgatgcggaa
acgggcgaaacgctgagcccgctcgcggccttcctgacacatgcggcgctcgagtcgggc
gacaaccaggcgcaggccggccaggacgcggtgcagctcatgaccgtgcacgctgccaag
ggcctggagttcgactgcgtgttcatcaccggcatggaagagggcctgttcccgcacgag
aactcgatgagcgatttcgagagcctcgaggaagagcgccgcctcatgtacgttgcgatc
acgcgggcgcgcaagcgcctgtacctgagccactcgcagacgcgcatgctgcacggccag
acccgctacaacgtcaagagccgcttcttcgacgaactgcccgaaagcgcgctcaagtgg
ctcacgccgaagaaccagggctttgcgccctcggccttcggctatggcggcggctacggc
agcacgcgcggcggtgccggtggctacggtggcggtgggggcggcggcaaccgctacggt
ggtggcagcagcgccggcaaggacaccttcgccagcccgcccgtgccgccgcagaagacc
gcgccgtcgcacggtttgcgttcaggcatgcaggtgttccacaacaagttcggcgagggc
acggtgaccgcgctcgaaggcacgggcgacgacgcacgggcgcaggtgaagttcgcgcgc
cacggcgtgaagtggctggcgctgtcggtggcgaaactcacgccggtttga
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