KEGG   Variovorax sp. EBFNA2: RZE79_10930
Entry
RZE79_10930       CDS       T10564                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
vae  Variovorax sp. EBFNA2
Pathway
vae00061  Fatty acid biosynthesis
vae00071  Fatty acid degradation
vae01100  Metabolic pathways
vae01212  Fatty acid metabolism
vae02024  Quorum sensing
vae04146  Peroxisome
Module
vae_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vae00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RZE79_10930
   00071 Fatty acid degradation
    RZE79_10930
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    RZE79_10930
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RZE79_10930
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vae01004]
    RZE79_10930
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vae04147]
    RZE79_10930
Enzymes [BR:vae01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RZE79_10930
Lipid biosynthesis proteins [BR:vae01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   RZE79_10930
Exosome [BR:vae04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RZE79_10930
  Exosomal proteins of breast cancer cells
   RZE79_10930
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 MraZ
Other DBs
NCBI-ProteinID: WPG39824
LinkDB
Position
complement(2353733..2355565)
AA seq 610 aa
MTTPTTNPLPSLTLPQMLREQARLQPQRIAIRQKDFGIWHPLDWAGYLQRASRFGLGLHA
MGLAPGGHLGVISENRVEWLLAQMGAGLIGAVTVGVYPTSPSNEVAYVVGHADIEVIVCE
DQEQTDKVLDALDQLPRLRKIVVIETKGLASYPPEVRERIATFAEVEQAGAEVLARDGSA
LIDAALQRQTLADIGLMIYTSGSTGKPKGAMISYRNIRGVVPGIVERLGLDGSTTHLSYL
PLCHVAEQMLTAFVPLYLGSQVNFGESIRTVQEDLREVAPTMFLGVPRIWEKLHAGISIK
MQEAGGLQRALFRKAIEACAPLAEKPRSAWTLAERGRFALAYWTVLRALQNFIGLRRARI
ALTGAAPIPADVVRFFRTLGVPLVEVYGLTESTGMVAGHRADAVTIGTVGPPTQGTEHRV
GEAGELLVRGDMVFEGYYKNPEATASSIRDGWLHTGDVVREEAGGQLRIVDRLKDIMITA
GGKNLTPSEIENTMKGSPFIKECIVVADGRKFVGALLQIDYETVGKWAEAQRLPFTHFRS
LVEEPKVRALIEAEVARGNGKLAQVSQIRRFHLLTKELDHDDGEVTATMKVRRSSIYKSY
ANEIEALYSA
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgacgaccccgacgacgaacccgctcccttcgctcacgctgccgcagatgctgcgcgag
caggcgcgcctgcagccgcagcgcatcgcgatccggcagaaggacttcggcatctggcat
ccgctggactgggccggctacctgcaacgcgccagccgtttcggcctgggcctgcacgcg
atgggcctcgcgcccggcgggcacctcggcgtgatctccgagaaccgtgtcgaatggctg
ctcgcgcagatgggcgcggggctcatcggcgccgtgaccgtgggcgtgtatcccaccagc
ccgagcaacgaggtcgcgtacgtggtcggccatgcggacatcgaggtgatcgtctgcgaa
gaccaggagcagaccgacaaggtgctcgacgcgctcgaccagctgccgcgcctgcgcaag
atcgtcgtgatcgagaccaagggcctcgcgagctacccgcctgaagtgcgcgagcgcatc
gcgacctttgcagaggtcgagcaggccggtgccgaggtgctggcacgcgacggcagcgcg
ctcatcgacgccgcgctgcagcgccagacgctcgccgacatcggcttgatgatctacacc
tcgggctccaccggcaagcccaagggcgcgatgatttcgtaccgcaacatccgcggcgtc
gtgcccggcatcgtcgagcggctcgggctcgacggcagcaccacgcacctgtcgtacctg
ccgctgtgccacgtggccgagcagatgctcacggccttcgtgccgctgtacctgggctcg
caggtcaacttcggcgaatcgatccgcaccgtgcaggaagacctgcgcgaggtggcgccc
accatgttcctcggcgtgccgcgcatctgggaaaagctgcacgcgggcatcagcatcaag
atgcaggaagccggtggcttgcagcgcgcgttgttccgcaaggccatcgaggcttgcgca
ccgctggccgagaagccgcgcagcgcctggacgctggccgagcgcggccgcttcgccctc
gcctactggaccgtgctgcgcgcgctgcagaacttcatcggcctgcgccgcgcacgcatc
gcgctcacgggcgcggcgccgattcccgcggacgtggtgcgcttctttcgcacgctgggc
gtgccgctggtcgaggtgtacgggctcaccgaatcgaccggcatggtcgcgggccatcgc
gccgacgccgtgaccatcggcaccgtcggcccacccacgcagggcaccgagcaccgcgtg
ggcgaagcgggcgagctgctggtgcgcggcgacatggtgttcgagggctactacaagaac
cccgaggccacggcctcatcgatccgcgatggctggctgcacacgggcgacgtggtgcgc
gaggaagccggtggccagctgcgcatcgtcgatcggctgaaggacatcatgatcaccgcc
ggcggcaagaacctcacgccctcggagatcgagaacaccatgaagggcagccccttcatc
aaggaatgcatcgtggtggcggacggccgcaagttcgtcggcgcgctgctgcagatcgat
tacgagacggtcggcaaatgggccgaagcccagcgcctgccgttcacgcactttcgctcg
ctggtggaagaacccaaggtgcgcgcgctgatcgaggccgaagtggcgcgcggcaatggg
aagctggcgcaggtgtcgcagatcagacgttttcatctgctcaccaaagagttggaccat
gacgacggtgaagtcaccgcgaccatgaaggtgcggcgctccagcatctacaagtcttac
gccaacgagatcgaggcgctgtacagcgcctga

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