Variovorax sp. EBFNA2: RZE79_11975
Help
Entry
RZE79_11975 CDS
T10564
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00260
Glycine, serine and threonine metabolism
vae00630
Glyoxylate and dicarboxylate metabolism
vae00670
One carbon pool by folate
vae00785
Lipoic acid metabolism
vae01100
Metabolic pathways
vae01110
Biosynthesis of secondary metabolites
vae01200
Carbon metabolism
Module
vae_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RZE79_11975 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RZE79_11975 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RZE79_11975 (gcvP)
00670 One carbon pool by folate
RZE79_11975 (gcvP)
Enzymes [BR:
vae01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
RZE79_11975 (gcvP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WPG40024
LinkDB
All DBs
Position
complement(2566885..2569794)
Genome browser
AA seq
969 aa
AA seq
DB search
MPIPALPSLQELENAEEFLARHIGIDAADEARMLPVIGSETRAELIDGIVPAAIRRAKPM
RLPAPVTEADALAELKTLASKNKVFKSFIGQGYYGTHTPGVILRNILENPAWYTAYTPYQ
AEISQGRMEALLNFQTMVCDLTGMAIANASMLDEATAAAEAMTLAKRSVKSKSNVFLVSG
DCHPQTIEVIKTRAAPLGIEVKVSTVSETLPHLMVSGEFFGVLAQYPATTGHVHDLRPLA
GHAHQCDAAFIVAADLLALTLLVAPGEFDADIVCGTTQRFGMPLCNGGPHAAYLACRDSF
KRSLPGRLVGVSVDTHGQPAYRLALQTREQHIRREKATSNICTAQVLPAVVASMYAVYHG
PDGLTRIAQRVAVLTAILARGLSQMGREPVNTTAFDSLTIRTGDDTAAIIERAQAGGVNL
RQRLQQHLGISLDETTTRADIETLWALFVPAGTAMPRFDELAESTTPLIPDDLRRTSAFL
THPVFNTHKSETAMLRYIRSLSDKDLALDRSMIPLGSCTMKLNATSEMIPITWPEFANIH
PFAPAEQLQGYAQLDAQLRAWLCEATGYAGISLQPNAGSQGEYAGLLAIKSFHEAKGQGH
RNICLIPSSAHGTNPASAQMVGLQVVVTACDAQGNVDMDDLKRACEKHSAHLAAVMITYP
STHGVFETRVKELCELVHEHGGRVYVDGANMNALVGVAAPGEFGGDVSHLNLHKTFCIPH
GGGGPGVGPVCVVEDLVPYLPGHATAGVPSNGVGAVSAAPLGNAAVLPISWMYCRMMGAK
GLQAATETAILSANYISARLKDHYPTLYASPNGHVAHECILDLRPLKDTSGVTAEDVAKR
LIDYGFHAPTLSFPVPGTLMVEPTESEPLAELDRFVDAMIAIRGEIRRVEEGVWSKDDNP
LKHAPHTAASLLGSEWSHPYSRELGAFPLAELKQAKYWPPIGRVDNVYGDRNLFCSCVPV
GDYQEAEEA
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgccgattcccgcccttccctctttgcaagaactagagaacgccgaagaatttctcgcc
cgccacatcggcatcgatgcagcggacgaggcgcgcatgctgccggtgatcggctcggaa
acgcgtgcggagctcatcgacggcatcgtgccggcggccatccgccgcgcgaagccgatg
cgcctgcccgcgccggtgaccgaagccgacgcgctggccgagctgaagacgctggcgtcg
aagaacaaggtgttcaagagcttcatcggccagggctactacggcacgcacacgccgggc
gtgatcctgcgcaacatcctggagaaccccgcctggtacacggcctacacgccctaccag
gccgaaatctcgcagggccgcatggaagccctgctcaacttccagacgatggtgtgcgac
ctcacgggcatggccatcgccaacgcctcgatgctcgacgaggccacggcagccgccgag
gccatgacgctcgccaagcgcagcgtgaaaagcaagagcaacgtgttcctggtgtcgggt
gattgccacccgcagaccatcgaggtcatcaagacgcgcgccgcgccgctgggcatcgaa
gtcaaggtgagcaccgtgtcggaaacgctgccgcacctgatggtgagcggcgagttcttc
ggcgtgctcgcacagtaccccgccaccaccggccacgtgcacgacctgcgcccgctcgcg
ggccacgcacaccagtgcgacgccgccttcatcgtcgcggccgacctgctggcgctgact
ctcttggtcgcccccggcgagttcgatgccgacatcgtctgcggcaccacgcagcgcttc
ggcatgccgctgtgcaacggcggcccgcacgccgcctacctggcctgccgcgattcgttc
aagcgctcactgcccggccgcctcgtcggcgtgagcgtcgacacgcacggccagcccgcc
taccgcctcgcgctgcagacgcgcgagcagcacatccgccgcgagaaagccacctccaac
atctgcaccgcgcaggtgctgccggccgtggtcgccagcatgtacgccgtgtaccacggc
cccgacggcctcacgcgcattgcccagcgcgtggccgtgctcaccgccatcctcgccagg
ggcctgtcgcagatgggccgcgagccggtgaacaccaccgccttcgactcgctgacgatc
cgcaccggcgacgacacggccgcgatcatcgagcgtgcgcaggccggcggcgtcaacctg
cgccagcgcctgcagcagcacctgggcatctcgctggacgaaaccaccacgcgcgccgac
atcgaaaccctgtgggcgctgttcgtgcccgccggcaccgcgatgccgcgcttcgacgaa
ctggccgagagcaccacgccgctgattcccgacgacctgcgtcgcaccagcgccttcctc
acgcacccggtgttcaacacccacaagagcgaaaccgcgatgctgcgctacatccgcagc
ctgtcggacaaggacctcgcactcgaccgcagcatgatcccgctgggcagctgcaccatg
aagctcaacgcgaccagcgagatgatccccatcacctggcccgagttcgcgaacatccac
ccctttgcgcccgccgagcagctgcagggctacgcccagctcgacgcgcaactgcgcgcc
tggctgtgcgaggccacgggctacgcgggcatcagcctgcagcccaatgcgggctcgcag
ggcgagtacgcgggcctgctggccatcaaatcgttccacgaagccaagggccagggccac
cgcaacatctgcctgattccctcgtcggcgcacggcaccaacccggccagcgcccagatg
gtgggcctgcaggtggtggtgacggcctgcgacgcgcaaggcaacgtcgacatggacgac
ctgaagcgcgcctgcgaaaaacacagcgcccacctggccgccgtgatgatcacctacccg
agcacgcacggcgtgttcgaaacgcgcgtgaaggaactctgcgaactcgtgcatgaacac
ggcggccgcgtgtacgtcgacggcgccaacatgaacgcgctggtcggtgtggccgcgccg
ggtgaattcggcggcgacgtgagccacctgaacctgcacaagaccttctgcattccgcac
ggcggcggcggcccgggcgtcggcccggtctgcgtggtcgaagacctcgtgccgtacctg
ccgggccatgcgacggccggcgtgccctcgaacggcgtgggcgccgtgtcggccgcgccg
ctgggcaatgcggccgtgctgccgatcagctggatgtactgccgcatgatgggcgccaag
ggcctgcaggccgcgaccgaaacggccatcctgagcgccaactacatcagtgcgcgcctg
aaggaccactaccccacgctgtacgcgagccccaacggccacgtcgcgcacgagtgcatc
ctggacctgcgcccgctcaaggacaccagcggcgtcaccgcggaagacgtggccaagcgc
ctcatcgactacggcttccacgcgcccacgctgagcttccccgtgccgggcacgctgatg
gtcgaacccaccgaaagcgaaccgctggccgagctcgaccgctttgtcgacgcgatgatc
gccatccgcggcgagatccgccgcgtcgaagaaggcgtctggtcgaaggacgacaacccg
ctcaagcacgcgccgcacaccgccgcgagcctgctcggcagcgagtggagccacccctac
tcgcgcgaactcggcgcgttcccgctggccgaactcaagcaggccaagtactggccgccg
atcggccgcgtcgacaacgtctacggcgaccgcaacctgttctgcagctgcgtgccggtg
ggcgactaccaggaagccgaagaggcctga
DBGET
integrated database retrieval system
