Variovorax sp. EBFNA2: RZE79_12235
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Entry
RZE79_12235 CDS
T10564
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00280
Valine, leucine and isoleucine degradation
vae00650
Butanoate metabolism
vae00907
Pinene, camphor and geraniol degradation
vae01100
Metabolic pathways
vae01120
Microbial metabolism in diverse environments
vae04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RZE79_12235
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RZE79_12235
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RZE79_12235
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RZE79_12235
Enzymes [BR:
vae01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
RZE79_12235
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Motif
Pfam:
HMGL-like
HTH_32
DUF7517
Motif
Other DBs
NCBI-ProteinID:
WPG40076
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Position
2626396..2627379
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AA seq
327 aa
AA seq
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MKTGNGTRLFINEVATRDGFQMESRFIPTDDKVALIDRLSTLGYAKIEVTSFTSAQAIPA
LRDGEEVMQRIVRRPGVVYTALVPNVRGAERALESRIDEFNIVMSVSETHNLSNLRMTRE
QSFAQLADVIALAQQARVPVNVSLSCVFGCPMEGDVPLETVQGWIDRFAALGVQGLTLCD
TTGMAHPTQVQAVCEAVRARHPALEWTAHFHNTRGMGLANTIAAVEAGIHRLDMSLGGIG
GCPYAPGATGNVATEDVVHMLQCMGYDTGMDLDGLIGAAAELESLVQHELPSQVSRAGHR
LTRHAPPADFNEIVERAKARAAQKENA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccggcaatggcacgcggctgttcatcaacgaagtcgccacgcgcgacggcttc
cagatggaaagccgattcattccgaccgacgacaaggtcgcgctgatcgaccggctgagc
acgctcggctacgccaagatcgaggtgacctcgttcacctcggcccaggcgatcccagcg
ctgcgcgatggcgaagaagtgatgcagcgcatcgtccgccggccgggcgtggtctacacc
gcgctcgtgcccaatgtgcgcggcgccgagcgcgcgctggaaagccgcatcgacgagttc
aacatcgtcatgtcggtcagcgagacgcacaacctcagcaacctgcggatgacgcgcgag
cagtcgttcgcgcagctggccgacgtgatcgcgttggcgcagcaggcgagggtgccggtg
aacgtgtcgctctcctgcgtgttcggttgcccgatggaaggcgacgtgccgctcgagacg
gtgcagggctggatcgaccgcttcgctgcgctgggcgtgcagggcctcacgctgtgcgac
accaccggcatggcgcatcccacgcaggtgcaggccgtgtgcgaggccgtgcgtgcgcgg
cacccggcgctggaatggacggcgcacttccacaacacaaggggcatgggcctggcgaac
accattgccgcggtcgaggccggcatccatcggctcgacatgtcgctcggcggcattggc
ggctgcccctatgcgccaggcgcgacgggcaatgtcgcgaccgaggacgtggtccacatg
ctgcagtgcatgggctacgacaccggcatggacctcgacgggctgatcggcgctgcggca
gaactcgaatcgctcgtgcagcacgagctgccgagtcaggtctcgcgcgctggtcaccgg
ctcacgcggcacgcaccgccagccgatttcaacgagatcgtcgagcgcgccaaggcacgc
gcggcccagaaggagaacgcatga
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