Variovorax sp. EBFNA2: RZE79_12450
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Entry
RZE79_12450 CDS
T10564
Name
(GenBank) Ig-like domain-containing protein
KO
K20276
large repetitive protein
Organism
vae Variovorax sp. EBFNA2
Pathway
vae02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RZE79_12450
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Ortholog
Paralog
GFIT
Motif
Pfam:
Big_13
Big_6
Cadherin_4
Big_3_5
Cadherin_5
Big_9
Motif
Other DBs
NCBI-ProteinID:
WPG40118
LinkDB
All DBs
Position
2671378..2674962
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AA seq
1194 aa
AA seq
DB search
MATKKKTKVVVNSNGRNIDHTVDAAATGKAPLKIKVQKGAKYLLKDEDGFAPENVTLTRV
GADLHITLEGETSPSLVLEGYYAQSEPVGLYGVAEDGQLYAYTGTDATSEVFSLTEGQST
AVALGGDSLGSGVPYLAGAEAGAGNDFLGGMFPLLITGGLAALGMGLIAASSGSDGDPGF
VGPVAPEPQPPGKPGFDSLSAYDDVGKVTGPIPHNGKTDDTRPDFSGTGATPGNTITIYD
DGTEIGKVVVDPNGNWELTPSKDLDEGKHSITITESDAGGRESQPSDPLVFEVDTKAPPA
PGWNGQGIGDVIDDVGTVTGSVPPGGATDDQRPEFKGEGTPGNTINVYDDETLLGSVQVG
DDGTWTFTPPSDLIEGGHSITITESDTAGNESLPSKPFEFDVDLSAPTQPEVGGAIDNVG
EIIGDIPPGGVTDDRQPELHGKGEPGGTIVIEDNGTEIGTVEVDEDGNWSFIPPEALEEG
DHSIVIVERDPAGNESKPSDPFDFVVDITPPDVSKLAITGVADDVGAITGHIASGGITDD
SHPVVSGTGTAGDTVIVSVKDITGEREIGRATVDAEGNWSLQVDKALLSGPNEFTAVEMD
PAGNKTVPSAPYDVTVDLATPPAPVIQNVQDDVGPSTGMLQKGELTDDARPTIIGTAQAG
ATVKVYDGTALLGQVVADATGKWSFTPETALADGRHDITATATSTVGQTSKPTGVWHFVV
DATAPGQVTDFDVTDDVGGTVGKLTEGMTTDDDRPTFSGKAEPGATVTVYDNGEKIGEAL
VAPDGNWSFTPSKPLPSGDHAFTTEVTDAAGNSSGPSDPLNVIVDAIPGVVVTATDKAGN
TSAPSAEFVLTTDFTPPAASGAVLSDNVGAIQGPIASGSITDDDTPTGTGNNTLKLSLGD
VMENGAVDQFVANGRVQMMVKGNAGDAVTLSDLLSGGTDPGDWVKGANVTVSGVVYEVYA
HSGFGAELLVQQGVAVTLQNTAASTFSSTGLEVDAVTVDAHSGYGTDVLSHATQAFTESD
DAIIARLGYADRLAGGAGNDVLSNVGTGDVAHGGVGDDTVRILSGDFERIDGGLGIDTLV
MDGKSMHIDLSALGLAKVQGFEKFDLGAGGNTLALSAADVLAGGARDMVTADGKVQMLVN
GANGDVDLLGGTAGDDGWTQGGNATVSGVTYQVYSNLAGTAELLVEDKVHVTIL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaagaagaagacgaaggtcgtcgtcaacagcaacggcaggaacatcgatcac
acggtggacgccgcagcgaccggcaaggcgccgctgaagatcaaggtccagaagggtgcc
aagtacctgctcaaggacgaagacggctttgcgcccgagaacgtgaccctcacccgcgtg
ggtgcggacctgcacatcacgctcgaaggcgagaccagcccgagcctggtgctcgagggc
tactacgcgcagtccgagcccgtgggcctgtacggcgtggccgaggacggccagctgtat
gcgtacaccggcaccgacgccacgagcgaggtcttctcgctgaccgaaggccagtcgacg
gccgtggcgctgggcggtgattcgctcggctccggtgtgccgtacctggcgggtgccgaa
gccggcgccggcaacgacttcctcggcggcatgttcccgctgctgatcaccggcggcctg
gccgcgctgggcatgggcctgatcgccgccagcagcggcagcgacggcgatcccggattc
gtcggacccgtggcccccgagccgcagcctcccggcaagcccggcttcgacagcctgagc
gcgtacgacgacgtcggcaaggtgacgggcccgatcccgcacaacggcaagaccgacgac
acgcgccccgatttctcgggcactggcgccacgcccggcaacaccatcacgatctacgac
gacggcaccgaaatcggcaaggtcgtcgtggacccgaacggcaactgggagctcacgcct
tccaaggacctggatgaaggcaagcattcgatcaccatcaccgaaagcgacgccggcggc
cgcgaaagccagccctccgacccgctcgtgttcgaagtcgacaccaaggccccgcccgca
ccgggctggaacggccagggcatcggcgacgtcatcgacgacgtcggcaccgtcaccggc
agcgtgcctccgggcggcgccacggacgatcagcgtcccgagttcaagggtgaaggcacc
cccggcaacaccatcaacgtgtacgacgacgagacgctgctgggcagcgtccaggtgggc
gacgacggcacatggaccttcacgccgccgtccgacctgatcgaaggcggccactccatc
accatcaccgagagcgacacggcgggcaacgagagcctgccgtcgaagccgttcgagttc
gatgtggacctgagcgcgccgacccagcctgaagtgggcggcgccatcgacaacgtcggc
gagatcatcggcgacattcccccgggcggcgtcaccgacgaccgccagcctgaactgcac
ggcaagggcgagcctggcggcaccatcgtcatcgaagacaacggcaccgaaatcggcacc
gtcgaagtggacgaagacggcaactggagcttcattccgcctgaagcgctggaagaaggc
gatcactccatcgtcatcgtcgagcgcgacccggccggcaacgagagcaagccctccgac
ccgttcgacttcgtggtcgacatcacgccgcccgacgtcagcaagctggccatcaccggc
gtggccgacgacgtgggcgccatcacgggccacatcgcctcgggcggaatcaccgacgac
agccaccccgtggtcagcggcaccggcacggccggcgacaccgtcatcgtgagcgtcaag
gacatcacgggcgagcgcgaaatcggtcgcgccaccgtcgacgcagaaggcaactggtcg
ctgcaggtcgacaaggcgctgctgtcgggccccaacgaattcaccgccgtcgaaatggac
ccggccggcaacaagaccgtgccgagcgcaccctacgacgtgacggtcgacctggcgacg
ccgccggcgcccgtgatccagaacgtgcaggacgacgtgggcccgagcacgggcatgctg
caaaagggtgagctcaccgacgacgcccggccgaccatcatcggtaccgcgcaggccggc
gccaccgtgaaggtgtacgacggcacggcgctgctgggccaggtcgtggccgacgccacg
ggcaagtggagcttcacgcccgagaccgcgctggccgacggccggcacgacatcaccgcc
acggccaccagcaccgtgggccagaccagcaagcccaccggcgtgtggcacttcgtggtg
gacgccacggcgccgggccaggtcaccgacttcgacgtcaccgacgacgtcggcggcacc
gtgggcaagctcaccgaaggcatgaccaccgacgacgaccgtccgaccttcagcggcaag
gccgagccgggcgcgaccgtgaccgtgtacgacaacggcgagaagatcggcgaagcgctg
gttgcgcccgacggcaactggagcttcacgcccagcaagccgctgcccagtggcgaccat
gcgttcaccaccgaggtgaccgacgccgccggcaattccagcggcccgagcgatccgctg
aacgtgatcgtggacgccattcccggcgtggtggtcaccgccaccgacaaggccggcaac
acgagcgcgccttcggccgagttcgtgctgaccaccgacttcacgccgcccgcagcctcg
ggcgcggtgctcagcgacaacgtgggcgcgatccagggccccatcgccagcggcagcatc
accgacgacgacacccccaccggcacgggcaacaacacgctcaagctgtcgctgggcgac
gtgatggaaaacggcgcggtcgaccagttcgtggccaacggccgcgtgcagatgatggtc
aagggcaatgccggtgatgcggtgacgctgagcgacctgctgtccggcggcaccgacccg
ggcgactgggtcaagggcgccaacgtgacggtctcgggcgtggtctacgaggtgtatgcg
cactcgggcttcggcgccgaactgctggtgcagcagggtgtggcggtcacgttgcagaac
acggcggccagcaccttcagcagcaccggcctcgaggtcgatgcggtgacggtggacgcg
cattcgggctacggcaccgacgtgctcagccacgcgacgcaggcgttcaccgagagcgac
gacgcgatcatcgcgagactcggctacgcagaccgactggcagggggcgccggcaacgac
gttctttcgaacgtcggcacgggcgacgtggcgcacggcggcgtgggcgacgacaccgtt
cgcatcctgagcggcgacttcgagcgcatcgacggcggcctgggcatcgacaccctggtg
atggatggcaagtcgatgcacatcgacctgtcggccctcggcctggcgaaggtgcagggc
ttcgagaagttcgacctcggcgcaggcggcaacacgctggcgctgagcgcggctgacgtg
ctggccggcggtgcgcgtgacatggtcacggccgacggcaaggtgcagatgctggtcaat
ggcgccaacggcgacgtcgacctgctcggcggcacggccggcgacgacggctggacgcag
ggcggcaacgccacggtgagcggtgtgacgtaccaggtctacagcaacctcgccggcacg
gccgagctgctggtcgaggacaaggttcacgtgaccatcctctaa
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