Variovorax sp. EBFNA2: RZE79_13355
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Entry
RZE79_13355 CDS
T10564
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00260
Glycine, serine and threonine metabolism
vae00460
Cyanoamino acid metabolism
vae00630
Glyoxylate and dicarboxylate metabolism
vae00670
One carbon pool by folate
vae00680
Methane metabolism
vae01100
Metabolic pathways
vae01110
Biosynthesis of secondary metabolites
vae01120
Microbial metabolism in diverse environments
vae01200
Carbon metabolism
vae01230
Biosynthesis of amino acids
vae01240
Biosynthesis of cofactors
vae04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RZE79_13355 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RZE79_13355 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RZE79_13355 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RZE79_13355 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RZE79_13355 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RZE79_13355 (glyA)
Enzymes [BR:
vae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RZE79_13355 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
WPG40291
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Position
complement(2868181..2869425)
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AA seq
414 aa
AA seq
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MYHRNILVEQTDPEIWAAIQAENARQEHHIELIASENYASPAVMQAQGSQLTNKYAEGYP
GKRYYGGCEHVDVAEQLAIDRVKQIFGADAANVQPHCGASANEAVMLAFLKPGDTIMGMS
LAEGGHLTHGMPLNMSGKWFNVVSYGLDANEAIDYDAMERKAHEHMPKLIIAGASAYSLH
IDFERFAKVAKDVGAIFMVDIAHYAGLVAAGVYPNPVPHADIVTSTTHKSLRGPRGGIIL
MKSQHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEAMTPEFKAYQQQVVKNAQIVADTLT
ERGLRIVSGRTESHVMLVDLRAKGITGKEAEAVLGAAHMTINKNAIPNDPEKPMVTSGVR
IGTPAMTTRGFKDEEARITANLVADVLENPRDAANIDAVRAKVHALTSRFPVYR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaccgcaacatcctggtcgaacagaccgatcccgaaatctgggccgcgattcaa
gccgaaaacgcgcgccaggaacaccacatcgagctgatcgccagcgagaactacgcctcg
ccggccgtcatgcaggcccagggctcgcagctcactaacaagtacgccgaaggctacccg
ggcaagcgctactacggcggctgcgagcacgtcgacgtggccgagcaactggccatcgac
cgcgtcaagcagatcttcggcgccgatgccgccaacgtgcagccgcattgcggcgcctcg
gccaacgaagccgtgatgctcgccttcctgaagcccggcgacaccatcatgggcatgagc
ctggccgaaggcggccacctgacccacggcatgccgctcaacatgagcggcaagtggttc
aacgtggtgagctacggcctggacgccaacgaagccatcgactacgacgcgatggaacgc
aaggcgcatgagcacatgcccaagctgatcattgcgggcgcctcggcctactcgctgcac
atcgacttcgaacgtttcgccaaggtcgccaaggacgtcggcgcgatcttcatggtcgac
atcgcccactacgccggcctcgtggccgcgggcgtgtaccccaacccggtgccgcacgcc
gacatcgtgacctcgaccacgcacaagagcctgcgtggcccgcgcggcggcatcattttg
atgaagtcgcagcacgaaaaagccatcaacagcgccatcttccccggcctgcaaggcggc
ccgctgatgcacgtgatcgccgccaaggccgtcgcgttcaaggaagccatgacgcccgag
ttcaaggcctaccagcaacaggtggtcaagaacgcccagatcgtggccgacaccctcacc
gagcgcggcctgcgcatcgtgagcggacgcaccgagagccacgtcatgctggtcgacctg
cgcgccaagggcatcaccggcaaggaagccgaagccgtgctgggcgccgcccacatgacg
atcaacaagaacgcgatccccaacgacccggaaaagccgatggtcaccagcggcgtgcgc
atcggcactcccgccatgaccacgcgcggcttcaaggacgaagaggcccgcatcacggcg
aacctggtggccgacgtgctcgagaacccgcgcgacgcggcgaacatcgacgcggtgcgc
gccaaggtccatgccttgacgagccgcttccctgtctaccgttga
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