Variovorax sp. EBFNA2: RZE79_14355
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Entry
RZE79_14355 CDS
T10564
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00220
Arginine biosynthesis
vae00240
Pyrimidine metabolism
vae00250
Alanine, aspartate and glutamate metabolism
vae01100
Metabolic pathways
vae01110
Biosynthesis of secondary metabolites
vae01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RZE79_14355 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RZE79_14355 (carB)
00220 Arginine biosynthesis
RZE79_14355 (carB)
Enzymes [BR:
vae01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
RZE79_14355 (carB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
ATP-grasp_5
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WPG40474
LinkDB
All DBs
Position
3070193..3073441
Genome browser
AA seq
1082 aa
AA seq
DB search
MPKRTDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPAT
ADVTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLDKYTGAATNKPV
ELIGATPEAIDKAEDRLKFKDAMTKIGLGSARSGIAHTMDEAWAVQKTLGFPTVIRPSFT
LGGTGGGIAYNPDEFETICKRGIEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCS
IENLDPMGVHTGDSITVAPAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDG
RMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSID
YVVTKIPRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLNEKT
QDREVLEKELGEPGPERIWYVGDAFAMGLSVDEVFALTKIDPWFLVQIEEIVKIELELET
KSLDDIDKDTLLALKKKGFSDRRLAKQLKTTDTAVREKRRALGVRPVYKRVDTCAAEFAT
NTAYMYSTYEDECEADPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMV
NCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPLGVIVQYGGQTPLKLALDLEANGV
PIIGTSPDMIDAAEDRERFQKLLHELGLRQPPNATARTEPEALEKAAALGYPLVVRPSYV
LGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAVECDVDCIRDAEGGTLIGGV
MEHIEQAGVHSGDSACSLPPYSLNADTIAELKRQSAAMAKALNVVGLMNVQFAIQQKDGK
DVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQSLASQGITKEVTPPYFSVKEAV
FPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGTHLPKSGKAFISVKNNDK
ARAVEVARGLAKLGFELVATKGTAAAISAAGIACETVNKVTEGRPHIVDMIKNNEIALVI
NTVEERRNAITDSRQIRTSALLARVTTFTTIFGAEAAVEGMGFMDELGVISVQEMHAQLA
AA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgcacagacctcaaatcgatcctcatcatcggcgccggcccgatcatcatc
ggccaggcctgcgagttcgactactccggcgtgcaagcctgcaaggcgctgcgcgaagag
ggctacaaggtcatcctgatcaacagcaaccccgcgacgatcatgaccgacccggccacg
gccgacgtcacctacatcgagcccatcacctggcagacggttgagaaaatcatcgccaag
gaacgccccgacgcgatcctgccgacgatgggcggccagaccgcgctgaactgcgcgctg
gacctctggcgcaacggcgtgctcgacaagtacacgggcgcggccaccaacaagccggtc
gaactcatcggcgccacgcccgaagccatcgacaaggccgaagaccgcctgaagttcaag
gacgcgatgaccaagatcggtctcggttcggcgcgctcgggcatcgcccacacgatggac
gaagcctgggccgtgcagaagacgctcggcttcccgaccgtgatccgccccagcttcacg
ctcggcggcaccggcggcggcatcgcctacaaccccgacgaattcgagaccatctgcaag
cgcggcatcgaagcctcgccgaccaacgagctgctgatcgaagagtcgctgctcggctgg
aaagagtacgagatggaagtcgtgcgcgacaaggccgacaactgcatcatcgtctgctcg
atcgaaaacctcgacccgatgggcgtgcacaccggcgactcgatcaccgtggcccccgcg
cagacgctgtccgacaaggaataccagatcctgcgcaacgcctcgctggccgtgctgcgc
gaaatcggcgtggacaccggtggctcgaacgtccagttctccatcaacccgaaggacggc
cgcatggtcgtcatcgagatgaatccgcgcgtgtcgcgttcgtcggcgctggcctccaag
gccacgggtttcccgattgccaaggtcgcggccaagctggccgtgggctacacgctcgac
gagctgcgcaacgaaatcaccggcggtgccacgcccgcgtcgttcgaaccctcgatcgac
tatgtggtcaccaagatcccgcgtttcgcgttcgaaaaattcccgcaggccgactcgcgt
ctcaccacgcagatgaaatcggtgggtgaggtgatggccatgggccgtaccttccaggag
tcgttccagaaggccctgcgcggccttgaagtgggcgtcgacggcctgaacgagaagaca
caggaccgcgaagtgctcgaaaaggaactgggcgagcccggtcccgagcgcatctggtac
gtgggcgatgcctttgccatgggcctgagcgtggacgaagtgttcgcgctgaccaagatc
gatccgtggttcctggtgcagatcgaagagatcgtgaagatcgagctcgagctggaaacc
aagtcgctcgacgatatcgacaaggacacgctgctcgcgctcaagaagaagggcttctcc
gaccggcgcctcgccaagcaactcaagaccaccgacacggccgtgcgcgaaaagcgccgc
gccctgggcgtgcgtccggtctacaagcgcgtcgacacctgcgcggccgagttcgcgacc
aacacggcctacatgtactcgacctacgaggacgagtgcgaggccgatccgacggacaag
aagaagatcatggtgctcggcggcggtcccaaccgcatcggccagggcatcgagttcgac
tactgctgcgtgcacgccgcgctcgcgatgcgcgaagatggctacgagaccatcatggtc
aactgcaaccccgagaccgtgtcgaccgactacgacacctccgaccgcctgtacttcgag
ccgctcacgctcgaagacgtgctcgagatcgtcgacaaggaaaagccgctcggcgtaatc
gtgcagtacggcggccagacgccgttgaagctcgcgctcgacctcgaagccaacggcgtg
ccgatcatcggcacctcgcccgacatgatcgatgcggccgaagaccgtgagcgcttccag
aagctgctgcacgagctgggcctgcgccagccgccgaacgccaccgcgcgtacggaaccc
gaagcactcgaaaaggctgccgccctgggctacccgctggtggttcgccccagctacgtg
ctcggcggccgcgcgatggaaatcgtgcacgagcagcgcgacctcgagcgctacatgcgt
gaagcggtcaaggtgagcaacgactcgccggtgctgctcgaccgcttcctgaacgacgct
gtcgaatgcgacgtcgactgcatccgcgacgccgaaggcggcacgctgatcggtggcgtg
atggagcacatcgaacaagccggcgtgcactcgggcgactccgcctgctcgctgccgccc
tacagcctgaacgccgacaccatcgccgaactgaagcgccagagcgccgcgatggccaag
gcactgaacgtggtcggcctgatgaacgtgcagttcgccatccagcaaaaggatggcaag
gacgtcatctacgtgctcgaagtgaacccgcgtgcgtcgcgcaccgtgccttacgtgagc
aaggccacgggcatccagctcgccaaggtggcggcacgctgcatggccggccagtcgctc
gcatcgcagggcatcacgaaggaagtcacgccgccgtacttcagcgtgaaggaagccgtg
ttcccgttcgtcaagttcccgggcgtggacaccatcctcggccccgagatgaagtcgacc
ggcgaagtgatgggcgtgggcaagaccttcggcgaagccttcgtgaagtcgcagctgggc
gcgggcacgcacctgccgaagtcgggcaaggccttcatctcggtgaagaacaacgacaag
gcgcgcgccgtcgaagtggcacgcggcctggccaagctgggcttcgaactggtcgccacc
aagggcaccgccgcggccatcagcgccgccggcatcgcctgcgagacggtcaacaaagtg
accgaaggtcgtccgcacatcgtggacatgatcaagaacaacgaaattgccttggtcatc
aacacggtggaagagcgccgcaacgcgatcaccgattcgcggcagatccgcacctcggca
ctgctggcccgtgtgaccaccttcaccacgatcttcggcgccgaagccgcggtggaaggc
atgggcttcatggacgagctgggcgtgatctcggtgcaggagatgcacgcgcagctggct
gctgcctga
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