Variovorax sp. EBFNA2: RZE79_14465
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Entry
RZE79_14465 CDS
T10564
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00541
Biosynthesis of various nucleotide sugars
vae01100
Metabolic pathways
vae01250
Biosynthesis of nucleotide sugars
Module
vae_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RZE79_14465 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vae01005
]
RZE79_14465 (kdsB)
Enzymes [BR:
vae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
RZE79_14465 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
vae01005
]
Lipid A
RZE79_14465 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
ADH_zinc_N
RTX
Motif
Other DBs
NCBI-ProteinID:
WPG40495
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Position
complement(3093340..3094113)
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AA seq
257 aa
AA seq
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MSFTVLVPARLASTRLPNKPLADIAGLPMVVRVAQRARQSGALRVVVAGDDASIIEACKA
HGVEALLTRQDHASGTDRLAEACEQLGLDGDAIVVNVQGDEPLIDPALIDAVAATLAARP
HAAMSTAVHAIDSLADFMNPNVVKAVLDAQGHALYFSRAPIPWWRDGSSGGAAPSVLPSP
APLRHIGIYGYRAGFVRQFPLLSPAPVEATEALEQLRALWHGHRIAVHVSDVAPGPGIDT
PEDLARVRAVFAAGLPA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttcaccgttctggtgccggcccggctggcttcgacgcgacttcccaacaaaccc
ctggccgacatcgccggcctgccgatggtcgtgcgcgtggcacaacgcgcccgccagtcc
ggcgcccttcgcgtggtggtggccggtgacgacgcctccatcatcgaggcctgcaaggcg
cacggcgtcgaagccctgctgacccgccaggaccacgccagcggcaccgaccggctggcc
gaagcctgcgaacagctcgggctcgacggcgacgcgatcgtcgtcaacgtgcagggcgac
gaaccgctgatcgaccccgcgctgatcgatgccgttgccgccacgctggccgcgcgcccg
catgccgcgatgagcaccgccgtccatgcgatcgattcgctggccgacttcatgaacccg
aacgtcgtgaaggccgtgctcgacgcacaaggccatgcgctctacttcagccgcgccccg
atcccctggtggcgcgacggctcttcaggtggagcggcaccctcggtgctgcccagcccc
gcaccgctgcgccacatcggcatctacggctatcgcgcgggcttcgtgcggcaatttccg
ttgctgtcgcctgcgcctgtcgaagccaccgaagcgctcgagcagctgcgcgcgctgtgg
cacggacaccgcatcgcggtgcatgtcagcgacgtggcaccgggccccgggatcgacacg
cccgaagacctggcgcgcgtgcgcgcggtcttcgcggccggcttgcctgcgtga
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