Variovorax sp. EBFNA2: RZE79_14515
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Entry
RZE79_14515 CDS
T10564
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00020
Citrate cycle (TCA cycle)
vae00480
Glutathione metabolism
vae00720
Other carbon fixation pathways
vae01100
Metabolic pathways
vae01110
Biosynthesis of secondary metabolites
vae01120
Microbial metabolism in diverse environments
vae01200
Carbon metabolism
vae01210
2-Oxocarboxylic acid metabolism
vae01230
Biosynthesis of amino acids
vae04146
Peroxisome
Module
vae_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vae_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RZE79_14515 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
RZE79_14515 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RZE79_14515 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RZE79_14515 (icd)
Enzymes [BR:
vae01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
RZE79_14515 (icd)
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
WPG40503
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All DBs
Position
3100132..3101391
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AA seq
419 aa
AA seq
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MSSYQHIKVPTEGQKITVNADNSLNVPDQPIIPFIEGDGTGLDITPVMLKVVDAAVAKAY
SGKKKIHWMEVYAGEKSTKVYGPDVWLPEETLHAVRDYVVSIKGPLTTPVGGGIRSLNVA
LRQELDLYVCLRPIQYFEGVPSPVREPHKTNMVIFRENSEDIYAGIEFEAESDKAKKLIK
FLQDEMGVKKIRFPDTSGIGVKPVSREGTERLVRKAFQYAIDNDKPSVTLVHKGNIMKFT
EGGFRDWGYNLAAKEFGAELIDGGPWMKFKNPRTGKEITVKDSIADAFLQQILLRPAEYS
VIATLNLNGDYVSDALAAQVGGIGIAPGANLSDTVAMFEATHGTAPKYAGKDYVNPGSEI
LSAEMMLRHMGWTEAADLIISSMKKSIASKKVTYDFARLMDGATQVSCSGFGQVMIDNM
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctatcagcacatcaaagtcccgaccgaaggccagaagatcacggtcaacgcc
gacaattcgctcaatgtgcccgatcagccgatcatcccgttcatcgagggcgatggcacg
gggctggacatcacgccggtgatgctcaaggtggtggacgccgcagtggccaaggcctac
agcggcaagaagaagatccactggatggaagtctacgcaggcgagaagtcgaccaaggtc
tacggccccgacgtctggctccccgaggaaaccctgcatgcggtgcgcgactacgtggtc
tccatcaagggtccgctgaccacgcccgtcggcggcggcatccgctcgctgaacgtggcg
ctgcgccaggaactcgacctgtacgtctgcctgcgacccatccagtacttcgagggcgtg
cccagcccggtgcgcgagccgcacaagaccaacatggtcatcttccgcgagaactcggaa
gacatctacgccggcatcgaattcgaggccgaaagcgacaaggccaagaagctcatcaag
ttcctgcaggacgagatgggcgtcaagaagatccgcttcccggacacctcgggcatcggc
gtcaagccggtctcgcgcgaaggcaccgagcgcctcgtgcgcaaggccttccagtacgcg
atcgacaacgacaagcccagcgtgactctggtccacaagggcaacatcatgaagttcacc
gaaggtggcttccgtgactggggctacaacctggccgccaaggaattcggcgccgagttg
atcgacggcggtccgtggatgaagttcaagaacccgaggacgggcaaggagatcacggtc
aaggacagcatcgccgacgcgttcctgcagcagatcctgttgcgccccgccgagtacagc
gtgatcgcgacactgaacctgaatggtgactacgtgtccgacgcactggccgcacaggtc
ggtggcatcggcatcgctccgggcgcgaacctgagcgacaccgtcgccatgttcgaagcc
acccacggcacggcccccaaatacgccggcaaggactatgtgaacccgggttccgaaatc
ctgtccgcagagatgatgctgcgccacatgggctggaccgaagcggctgacctgatcatc
agctcgatgaaaaagtcgatcgccagcaagaaggtcacctatgacttcgcgcgtctcatg
gatggcgcaacgcaagtgagctgctccggtttcggtcaggtcatgatcgacaacatgtga
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