Variovorax sp. EBFNA2: RZE79_15795
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Entry
RZE79_15795 CDS
T10564
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vae03016
]
RZE79_15795 (truB)
Enzymes [BR:
vae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RZE79_15795 (truB)
Transfer RNA biogenesis [BR:
vae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RZE79_15795 (truB)
Prokaryotic type
RZE79_15795 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WPG34959
LinkDB
All DBs
Position
complement(3372486..3373442)
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AA seq
318 aa
AA seq
DB search
MNAPRTRVQRRPVHGVLLLDKPLGFSSNQALQKAKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLHLDADKTYEAIARLGVKTSTGDAEGEVIAERPVQVSPEDLARVEALFTGP
IRQVPPMHSALKKDGKALYEYAREGIEIERAPRDVVIYKLALTRLDDTSIRIVASVSKGT
YIRTLGEDIGEALGCGAHLTFLRRTATGGFGQAQCVSIEALEAMTEDERLARLLPAEALV
EGHSRVTLAAEDAARFLSGLRRRGGWADAEAVAVFGTDPQAFLGTAHVSAGELIPGRLLN
PIEIQQILLNAPQTEATP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccacgcacacgggtgcagcggcgccctgtgcatggggtgttgctgctcgac
aagccgctggggttttccagcaaccaggccttgcaaaaggccaagtggttgctgcgcgcc
gaaaaagcgggccataccggcacgctcgatccgctcgccacaggcgtgctgccgctttgt
ttcggcgccgccaccaaattcagtcaattgcacctcgacgccgacaagacgtacgaggcg
attgcgcgcctgggcgtcaagacgtccaccggtgacgccgagggcgaggtgatcgccgag
cgcccggtgcaggtttcgccagaagacctggctcgcgtcgaagcgctgtttacaggcccg
atccgccaggtgccgccgatgcacagcgcgctcaagaaagacggcaaggcgctgtacgag
tacgcccgcgaaggcatcgagatcgagcgcgcgccccgcgacgtcgtcatttacaagctc
gcactgacgcggctggacgacacaagcatccgcatcgttgcgagcgtgagcaagggcacc
tacattcgcaccctgggcgaagacatcggcgaggcactgggctgcggcgcgcacctgacc
ttcctgcgccgcacggccacgggcggtttcgggcaggcgcagtgcgtctcgatcgaggcg
ctcgaagccatgaccgaagacgagcgcctggcacgcctgttgcctgccgaagcgctggtc
gagggccacagccgcgtcacgctcgccgccgaagatgcggcacgttttctttcgggcctg
cgccgccgcggcggctgggccgatgccgaagcggtggccgtgttcggcaccgacccgcag
gcgttcctgggcaccgcccatgtgagcgctggcgaactgatcccggggcgcttgctgaac
cccatcgaaattcagcaaattcttttgaacgcaccacagaccgaagcgacaccatga
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