Variovorax sp. EBFNA2: RZE79_15960
Help
Entry
RZE79_15960 CDS
T10564
Name
(GenBank) CysB family HTH-type transcriptional regulator
KO
K13634
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vae03000
]
RZE79_15960
Transcription factors [BR:
vae03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RZE79_15960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Cro
DUF1442
Motif
Other DBs
NCBI-ProteinID:
WPG34991
LinkDB
All DBs
Position
3412966..3413907
Genome browser
AA seq
313 aa
AA seq
DB search
MNLHQFKFVQEAVRRGLNLTEAAKALHTSQPGVSKAIIELEEELGVEIFARHGKRLKRIT
EPGQHVIASIELIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVPVANLREAYP
KVNVSLHQGSPDQVARMVIDEIAEIGIATESLDGYAELVTLPCYEWQHVLVLPKDHPLAA
KERVSLEDLALEPIITYHPSFTGRTRIDHAFAQKKLTPRIALEAIDSDVIKTYVRLGLGV
GIVAEMAVRDESNADLVVRPMGHVFGQNIARVAFKRSAYLRNFVFKFAELLSDRLDRNLI
AKALSGHQQDYEL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcaccagttcaagtttgttcaggaagccgtgcggcgcggcctgaacctcacc
gaggcggccaaggcactgcacacctcgcagcccggcgtctccaaggcgatcatcgaactt
gaggaagagctcggcgtcgagatcttcgcccgccacggcaagcgcctgaagcgcatcacc
gaacccggccagcacgtcatcgcgagcatcgaactcatcatgcgcgaggtgggcaacctc
aagcgcatcggcgagcagttcagcgcgcaagacagcggcaccctctccatcgccaccacg
cacacccaggcgcgctatgtgctgccggtgcccgtggccaacctgcgcgaggcttatccg
aaggtcaacgtgagcctgcaccagggctcgcccgaccaggtggcgcgcatggtgatcgac
gaaatcgccgaaatcggcatcgccaccgaatcgctcgacggatacgccgagctggtcacg
ctgccctgctacgaatggcagcacgtgctggtgctgcccaaggaccacccgctggcggcc
aaggagcgcgtgtcgctcgaagacctggcgctcgagccgatcatcacgtaccacccgtcg
ttcaccggtcgcacgcgcatcgaccatgcgtttgcacagaagaagctgacgccgcgcatc
gcgctcgaagccatcgactccgacgtgatcaagacctacgtgcgcctcggcctgggcgtg
ggcatcgtggccgagatggccgtgcgcgacgagtcgaacgccgacctcgtggtgcgcccg
atgggccacgtgttcggccagaacatcgcgcgcgttgcgttcaagcgcagcgcctacctg
cgcaactttgtcttcaagttcgccgagctgctgtccgaccgcctcgaccgcaacctgatc
gcgaaggccctcagcggccaccagcaagattacgaactctga
DBGET
integrated database retrieval system
