Variovorax sp. EBFNA2: RZE79_17360
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Entry
RZE79_17360 CDS
T10564
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae03030
DNA replication
vae03430
Mismatch repair
vae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RZE79_17360 (dnaX)
03430 Mismatch repair
RZE79_17360 (dnaX)
03440 Homologous recombination
RZE79_17360 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vae03032
]
RZE79_17360 (dnaX)
03400 DNA repair and recombination proteins [BR:
vae03400
]
RZE79_17360 (dnaX)
Enzymes [BR:
vae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RZE79_17360 (dnaX)
DNA replication proteins [BR:
vae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RZE79_17360 (dnaX)
DNA repair and recombination proteins [BR:
vae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RZE79_17360 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_18
AAA_14
Rad17
AAA_5
AAA_30
AAA_19
nSTAND3
SKI
TsaE
AAA_assoc_2
AAA_28
AAA_2
Herpes_Helicase
Torsin
AAA_16
Adeno_E1B_55K_N
Motif
Other DBs
NCBI-ProteinID:
WPG35258
LinkDB
All DBs
Position
complement(3678259..3680124)
Genome browser
AA seq
621 aa
AA seq
DB search
MSYLVLARKFRPKTFGEMVGQGHVVQALENALTTQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCQGPDGQGGITATPCGVCQACRDIDSGRFVDYTELDAASNRGVDEVQSLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETILEHLAGVLQTEQVPAEAQALRLLARAARGSMRDALSLTDQAIAFGNGELLET
GVRQMLGSVDRGHVFRLIEALAQGDGKTVVDTSEALRRDGMSAASTLEEMTSVLQAMAVL
QAVPSRAESADAATDPDAADTARLASLMPADETQLLYSLCLHGRGELGLAPDEYAALTMV
LLRLLAFKPSQAAASAASTEKKTLNDAGGAAPRAPAREAAPVSRPPVPDSAPAAAPSTPA
FSQQPPAQSMPAGQRLTVVDAPQRQPMPRPAAQEASDAPAAHVVGVPIRVQPPPGQRDVP
REEEQRSTYTPIPPSEEGDFWHTTVMQLVAAESVAALARELALQSQLVARDTDQWMLRIE
RETLNQPSSREKLTAALQGLGHNVRLAIEIGGVVDSPARRNKQAADERQRVAEEAIRSDP
EVQMLMRDFDAKIVPGSLKPL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatctcgtgctcgctcgcaagttccgtccgaaaaccttcggtgagatggtcggt
caggggcatgtggtccaggcgctggaaaacgcgctgacgacgcagcgcctgcaccacgcc
tatctgttcaccggcacgcgaggcgtgggcaagaccacggtgtcgcgcatcctggccaag
tcgctcaactgccagggcccggacgggcagggcggcatcacggccacgccgtgtggtgtg
tgccaggcctgtcgcgacatcgattcgggccgcttcgtcgactacaccgagctcgatgcg
gcctccaaccgcggcgtcgacgaggtgcagtcgctgctcgaacaggccgtctacaagccg
gtgcaagggcgcttcaaggtcttcatgatcgacgaagtgcacatgctcacgaacaccgcg
ttcaacgcgatgctcaagacgctcgaggagccgcccgagtacctcaagttcgtgctggcc
acgaccgatccgcagaaggtgccggtgacggtgctctcgcgctgcctgcagttcaacctg
cggccgatggcgcccgagacgatcctcgaacacctggcaggcgtgctgcagaccgagcag
gtgccggccgaggcgcaggcgctgcgtctgctggcgcgcgccgcgcgcggctcgatgcgc
gacgcgctctcgctcaccgaccaggccatcgcgttcggcaacggcgagctgctcgaaacc
ggcgtgcgccagatgctcggcagcgtcgatcgcggccatgtgttccgcctcatcgaagcc
ctcgcacaaggcgacggcaagacggtggtcgacacctccgaggcgctgcgccgcgacggc
atgtccgccgcgtcgacgctcgaagaaatgacgtcggtgctgcaggccatggccgtgctg
caggccgtgccctcgcgcgccgaatcggccgatgcggccaccgaccccgacgcggccgac
acggcgcgcctggcgtcgctgatgcccgccgacgagacccaactgctctacagcctgtgc
ctgcatgggcgcggcgagctgggcctggcgcccgacgagtacgcggcactgaccatggtg
ctgctgcggctgctggccttcaagccctcccaagcggccgcttcggcggcctccacggaa
aaaaaaactctgaatgacgccggtggcgccgcgccgcgggctcccgcgcgcgaagccgcc
ccggtttcccggcctccggtgcccgattcggcacccgctgccgcgccttccacgcccgcc
ttttcgcagcaaccgcccgcgcagtcgatgccggccggccagcggctgacggtggtcgat
gccccgcagcgccagcccatgccccggcctgccgcgcaggaggcgtccgacgcgcccgca
gctcatgtggtcggcgtgccgatccgcgtgcagccaccacccggccagcgcgacgtgccg
cgcgaagaagaacagcgcagcacctacaccccgatcccgccgagcgaagagggcgatttc
tggcacaccacggtgatgcagctcgtcgccgccgaaagcgtggcggcgctggcgcgcgaa
ctggcgctgcagtcgcagttggtggcgcgcgacaccgaccagtggatgctgcgcatcgag
cgcgaaaccctcaatcagccctccagccgcgagaagctcacggcggcgctgcagggcctc
ggccacaatgtgaggctggccatcgagatcggcggcgtggtcgacagcccggcgcgccgc
aacaagcaggccgccgacgagcgccagcgggtggccgaggaagccattcgcagcgacccc
gaggtgcagatgctgatgcgcgacttcgatgcgaagatcgtgcccggatcgctgaagccc
ctctga
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