Variovorax sp. EBFNA2: RZE79_17380
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Entry
RZE79_17380 CDS
T10564
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vae03400
]
RZE79_17380
Enzymes [BR:
vae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RZE79_17380
DNA repair and recombination proteins [BR:
vae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RZE79_17380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
WPG35261
LinkDB
All DBs
Position
complement(3682116..3685388)
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AA seq
1090 aa
AA seq
DB search
MNGAAYEHNGRHVAREAFYTVACDPRRSVAVEACAGAGKTWMLVSRIVRALLEEGESACE
PHEILAITFTKKAAGEMRERLDQWLALFAELDPAASQRELVMRGMTPEAAQAAVPRLQGL
YRRLLEGGRPVQFRTFHAWFAGLLRNAPLAVLRELGLPANYELLEDDAEARTHTWRPFFE
AVTGDARALADYYAVVATHGRSQTAKALGEALSKRVEFTLSDAENAVTPFDVLYPTLQGL
DVPTDALRGEAVRRRWLDRAAALGREANKTPQKAAEAIIDVFGTGEPAPEALTDALAVLR
KTFFVASEDRLTKNLQKFPAAQEAETELQLLCAAQAQHAAWLYQQRMTRLTRLLISAFGE
VKRAHGWVDMNDVEQAAQLLLGQSALSGWVQERLDARVAHLLIDEFQDTNPLQWQALYGW
LSAYTGAGGSAPRVFIVGDPKQSIYRFRRAEPQVFIAAKKFVREGLGGELLNCDHTHRNA
RAVVGLVNSAMLAAQAAGEFDGYRAHTTERGDDGELLKLPAIDRDAVDTAAVAAPADDGM
LHWRDSLVTPRVLPEEQLLQKECEQAARWVAQRIADGTPPRQIMVLARRRSRLSAMQDVL
RRRHIPVQQPEKNDLNDAPEVQDVVALLDALVSPAHDLSLARALKSPLFGIDDDTLVQLA
RCQRETPGASWFSLIQKGEGLPPVLIEAGVQLRRWQRWLMAMPPHDALDAIFHDGDVLAK
FGAAVPAALRQSALANLRGLVAASLDIDGARFATPYALVRALRAGGVRAPTVAAPEAVQL
LTVHGAKGLEADTVLMLDCDAPPPRAQTMGVLVEWKGSDSAPTRFVFLASEKTPPACAAA
LLEEEQHARHREELNGLYVATTRARERLVLSSVKPSRANEGSWWTRLEPLCEPTEADEPL
VEASAAAEAASATFAMKRLPAPLVAATDAVPEKKKAQDATVDARAAAFGQAMHRLLEWAV
PGEALPPAHVRAAAREFMLDPQQARGAAALAQRIRAGAGAWVWDDRSIDWHGNEVTLVHE
GDTLRIDRLVRERATGAWWILDYKSAARPERDAALIAQMQRYRAAVQHAYPGATVRAAFL
TGQGELVNLE
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgctgcctacgaacacaacggccggcacgtcgcgcgcgaggccttctacacc
gtcgcctgcgacccgcggcgctcggtcgcggtcgaggcttgcgcaggcgccggcaagacc
tggatgctggtgtctcgcatcgtgcgtgcgctgctcgaagagggcgagtcggcctgcgag
ccgcacgagatcctggccatcaccttcaccaagaaggccgccggcgaaatgcgcgagcgg
ctcgaccagtggctcgcgctgttcgccgagctcgaccccgccgcctcgcagcgcgaactc
gtgatgcgcggcatgacgcccgaggccgcgcaggcggctgtgccgcgcctgcaggggctc
taccggcgcttgctcgaaggcgggcggcccgtgcagtttcgcaccttccacgcgtggttt
gcgggcctgctgcgcaacgcgccgctcgccgtgctgcgcgagctgggcctgccggcgaac
tacgaactgctcgaagacgatgccgaggcgcgcacccacacgtggcggccattcttcgaa
gccgtgaccggcgacgcgcgcgcgctggccgactactacgccgtcgtcgccacccacggc
cgctcgcagacggcgaaggcgctgggcgaggcgctgtcgaagcgcgtcgagttcacgctg
tccgatgctgagaatgcggtgacgcctttcgacgtgctgtacccgaccctgcaggggctg
gacgtgccgaccgatgcgctgcgcggcgaggccgtgcgccgtcgctggctcgaccgcgcc
gccgccctcggtcgcgaggccaacaagacgccgcagaaggcggccgaagccatcatcgat
gtctttggcaccggcgagcccgcacccgaggcgctgaccgacgcgctcgccgtgctgcgc
aagaccttcttcgtcgcgagcgaagatcggctcaccaagaacctgcagaaattccctgcc
gcgcaagaggccgaaaccgagctgcagctgctgtgcgctgcgcaggcccagcacgcggcc
tggctgtaccagcagcgcatgacgcggctcacgcgcctgctgatcagcgccttcggcgag
gtcaagcgcgcgcacggctgggtcgacatgaacgacgtcgagcaggccgcgcaactcctg
ctgggccagtccgcgctgtcgggctgggtgcaggagcggcttgatgcccgcgtcgcgcac
ctgctgatcgacgaatttcaggacaccaacccgctgcagtggcaggcgctctatggctgg
ctcagcgcctacacgggtgcgggcggcagtgcgccgcgcgtgttcatcgtgggcgacccc
aagcagagcatctaccgcttccgccgcgccgagccgcaggtgttcatcgccgccaagaag
ttcgtgcgcgaagggctgggcggcgaactgctcaactgcgaccacacgcaccgcaatgcg
cgcgccgtggtcggcctcgtcaacagcgcgatgctggccgcacaggcggccggcgagttc
gacggctaccgcgcccacaccaccgagcgtggcgacgacggcgaactgctgaagctgccc
gccatcgaccgcgacgcagtggacaccgccgcggtcgccgcgccggccgacgacggcatg
ctgcactggcgcgacagcctcgtcacgccgcgcgtgctgcccgaagagcagctgctgcag
aaggaatgcgagcaggccgcgcgctgggtcgcgcaacgcatcgccgacggcacgccgccg
cgccagatcatggtgctggcgcgccgccgcagccggctgtccgccatgcaggacgtgctg
cgccgccgccacattcccgtgcaacagccagagaagaacgacctgaacgatgcgcccgaa
gtgcaggatgtggtcgcgctgcttgatgcgctggtgtcgcccgcgcacgacctgtcgctg
gcacgcgcgctcaagtcgccgctcttcggcatcgacgacgacacgctggtgcaactggcc
cgctgccagcgcgagacgccgggggccagctggttctcgctgatccagaaaggcgagggt
ttgccgcccgtgctgatcgaggcgggcgtgcagctgcgccgctggcagcgctggctgatg
gcgatgccgccgcacgatgcgctggacgcgatctttcacgacggcgacgtgctcgcgaag
ttcggtgccgcggtgccggcagccttgcgccagagcgcgctggccaacctgcgcgggctg
gtcgctgcctcgctcgacatcgacggtgcgcgcttcgcgacgccttacgcgttggtgcgg
gccttgcgcgcgggcggcgtgcgcgcgcccaccgtggccgcgcccgaggccgtgcagctg
ctgaccgtgcacggtgccaagggcctcgaagccgacaccgtactgatgctcgactgcgat
gccccgccgccacgcgcgcagaccatgggcgtgctggtcgaatggaagggcagcgacagc
gcgccgacgcgcttcgtgttcctggccagcgagaagacgccgccggcctgcgccgccgcg
ttgctcgaagaagagcagcacgcgcgccaccgcgaagaactcaacggcctctacgtcgcg
accacgcgggcgcgcgagcggctggtgctgtcgtcggtgaagccatcgcgcgccaacgag
ggcagctggtggacgcggctggagccgctgtgcgagccgaccgaggccgacgagccgctg
gtcgaagcgtccgccgccgcggaagccgcatcggctaccttcgcgatgaagcgcctgccc
gcgccgctcgtggctgcaaccgatgcggtgcccgaaaagaagaaggcgcaagacgccacg
gtcgacgcgcgcgccgccgcgttcggccaggccatgcaccggctgctcgaatgggcggtg
cccggcgaggcgctgccaccggcccatgtgcgggcggctgcgcgcgagttcatgctcgat
ccgcaacaggcgcgcggtgccgcggcgctggcccagcgcatccgcgcgggcgccggggcc
tgggtgtgggacgatcgcagcatcgactggcatggcaatgaagtcacgctggtccatgag
ggcgacaccttgcgcatcgaccggctggtgcgcgagcgcgccaccggcgcatggtggatc
ctcgactacaaatcggccgcgcgccccgaacgggacgcggccctgatcgcacagatgcag
cgctaccgcgctgccgtgcaacatgcctaccccggtgccacggtgcgcgccgcgttcctg
accgggcagggcgaactggtgaatctcgaatga
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