Variovorax sp. EBFNA2: RZE79_17385
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Entry
RZE79_17385 CDS
T10564
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
vae Variovorax sp. EBFNA2
Brite
Enzymes [BR:
vae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RZE79_17385
DNA repair and recombination proteins [BR:
vae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RZE79_17385
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Other DBs
NCBI-ProteinID:
WPG35262
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Position
complement(3685385..3687940)
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AA seq
851 aa
AA seq
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MNEGHPVQALWCDPADGVVARIVRALGERQLHAARTVVLVPYAQLMAVARGMWARCGSPG
FVPRFETTHNWARSAGGFLPSGYDIAFDMARDLVTAQGLLAQSGFQSERFALAGRVVELA
YQLAPLAAAVAPELRSSDWAQSAAKVAEAGSESEWFRIESALIRVAVAWAANSGYATDVL
LRDAARTQVDALIVLEGFQTDPLTQALCALWGDRAIRIPLVPADAPPSAAHAHVALDPED
EAQLAAACVLQHLAEGRAPVALVATDRALTRRISAQLSTQGIVTHDETGWKLSTTRAAAT
LMSALRACAYDAATDQVLEWLKSGAEVDVLAVQSLEMRLRREGVRDWQAWCALIARSDKP
QDEGLRAFTLTIEARRAPMARARSLADWHRALRELLTAGEQWDALTADFAGAKVIGALWL
DADAHGEEDEFPGGRHSLAEFTAWARDVLEDASFVPPAGDETPKVSVLPMNQLLGRVFGA
VVIPGCDDRRMPASPEPPGNWSAAQRLDLGLASREVLEVAQRAAWAMATRNPCCDLVWRH
SDASGEPVRPSPLVQALQLAHVLQPGVDPRTPRDVAVTPTLRPTPSGAQLPLTNVSTSVY
EDLRRCPYRFFALRQLGLRTADELDAEVDKRDFGNWLHAVLGQFHETLRDAPTNDAQARA
ALLADTARDVTQTLGYSDAEFLPFAAAWPAVRDGYLEWLVKHEAGGAVFVEAEPWKEQPL
GTLRLVGRLDRVDRTADGQPFVIDYKTETASVTKERVKDPTEDTQLAFYAALVADDTLHA
AYVNVGEKSSGTQTVEQPAVVEARDALVAGIIDDFARIAQGAPLPPLGEGSVCDFCAARG
LCRKDFWEVTP
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaggccaccccgtccaggccctgtggtgcgatcccgccgacggcgtcgtcgcg
cggatcgtccgcgcgctcggcgaacggcagctgcatgcggcgcgcaccgtggtgctggtg
ccgtatgcgcagctgatggcggtcgcgcgcggcatgtgggcgcgctgcggcagcccgggc
ttcgtgccgcgcttcgaaaccacgcacaactgggcgcgcagcgcgggcggtttcctgccc
tccggctacgacatcgccttcgacatggcgcgcgacctggtcacggcgcagggcctgctc
gcgcagtcgggcttccagtccgaacgcttcgcgctcgcgggacgcgtggtcgagctggcc
taccaactggcgccgttggccgctgccgtggcgccggagctgcgcagcagcgactgggca
cagagcgcggccaaggtggctgaagcgggcagcgagtcggaatggttccgcatcgaaagc
gcgttgatccgcgtcgccgtggcctgggccgcgaactcgggctacgcgaccgacgtgctg
ctgcgcgacgcggcacgcacccaggtcgatgcgctgatcgtgctcgagggcttccagacc
gacccgctgacacaggcgttgtgcgcgctgtggggcgatcgcgcgatccgcattccgctc
gtgcccgccgacgcaccgccgtctgccgcgcacgcccacgtggcgctcgaccccgaagac
gaggcccagctcgcagccgcctgcgtgctgcagcacctggccgagggccgcgcgcccgtc
gcgctcgtcgccaccgaccgcgcgctcacccgccgcatcagcgcgcagctgagcacgcaa
ggcatcgtcacgcacgacgaaaccggctggaagctctccaccacgcgcgccgccgccacg
ctgatgagcgcactgcgcgcctgtgcatacgacgccgccaccgaccaggtgctcgaatgg
ctcaagagcggcgccgaggtcgatgtgctcgccgtccagtcgctcgaaatgcgcctgcga
cgcgaaggcgtgcgcgactggcaggcctggtgcgcgttgatcgcgcgcagcgacaaaccg
caggacgaaggcctgcgcgccttcaccctcaccatcgaagcccgtcgcgccccgatggcg
cgcgcgcgctccctggccgactggcaccgcgcgctgcgcgagctgctgacagccggcgaa
cagtgggacgcgctcaccgccgacttcgcaggcgccaaggtcatcggagccctctggctt
gatgccgacgcgcacggcgaagaagacgagttccccggcgggcgccacagcctcgctgaa
ttcacggcctgggcgcgcgacgtgctcgaagacgccagcttcgtgccgcccgccggcgac
gagacccccaaggtgtccgtgctgccgatgaaccagctgttgggccgcgtcttcggcgcg
gtcgtcattcccggctgcgacgaccgccgcatgcccgcgtcacccgaaccgccgggcaac
tggagcgcggcgcagcgccttgacctggggctggcgtcgcgtgaggtgctggaggttgcg
cagcgtgcagcctgggccatggccacgcgcaacccgtgctgcgacctggtctggcgccat
tccgacgccagcggcgaacccgtgcggccgagtccgctcgtgcaggccctgcaacttgcc
catgtgctgcagcccggcgttgatccgcgcacgccacgcgatgtcgctgtcacgccgacc
ctgcggcccacgccgtcgggcgcgcagctgccgctcaccaacgtgtcgaccagcgtctac
gaagacctgcgccgctgcccctatcgcttcttcgcgctgcgccaactgggcctgcgcacc
gccgacgagctcgatgccgaggtcgacaagcgcgacttcggcaactggctgcacgcggtg
ctcggccagttccacgagaccttgcgcgacgcaccgaccaacgatgcccaagcgcgtgct
gcgctgctcgctgacaccgcacgcgatgtcacgcagacgctcggctattccgatgccgag
ttcctgcccttcgccgccgcgtggccggcggtgcgcgacggttacctcgaatggctcgtg
aagcatgaagcgggtggggcggtcttcgtcgaggccgaaccctggaaagagcaacccctg
ggcaccttgcggctggtcggccggctcgaccgcgtcgaccgcaccgccgacggccagccc
ttcgtgatcgactacaagaccgagactgcctccgtcaccaaggagcgcgtgaaagacccg
accgaagacacgcagctcgccttctatgccgcgctggtggctgacgacaccctgcatgcg
gcctacgtcaacgtcggcgagaagtcgtccggcacgcagaccgtcgagcagccggccgtg
gtcgaggcgcgcgatgcgctggtcgccggcatcatcgacgacttcgcgcgcatcgcgcag
ggcgcgccgctgccgccgctgggcgaggggagcgtgtgcgatttctgcgccgcgcgcggc
ctgtgccgcaaggatttctgggaggtcacgccatga
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