Variovorax sp. EBFNA2: RZE79_18555
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Entry
RZE79_18555 CDS
T10564
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vae03009
]
RZE79_18555 (der)
Ribosome biogenesis [BR:
vae03009
]
Prokaryotic type
GTPases
RZE79_18555 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
AIG1
Dynamin_N
RsgA_GTPase
Roc
AAA_22
ABC_tran
SRPRB
Motif
Other DBs
NCBI-ProteinID:
WPG35488
LinkDB
All DBs
Position
complement(3903738..3905081)
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AA seq
447 aa
AA seq
DB search
MKPVVALVGRPNVGKSTLFNRLTQTRDAIVADFAGLTRDRHYGNGRLGKHEFIVIDTGGF
EPDAGSGIYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLGKPCVLAANK
AEGMHDGTKLVDFYELGFGDVHGVSAAHGQGMRDLVELALEPLNLPDPDDEEDEDDVNKP
IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQRFELIDTAGLRR
KGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVIAINK
WDAVDSYQREQIQRQIETRLPFLKFASLHFISAIKRQGLGPVWQAIAQAHKSATRKMSTP
VLTRLLLEAVQFQAPQRGGMYRPKLRYAHQGGMNPPVIIIHGNSLEHVTDAYKRFLEGRF
RKEFDLVGTPLRIQFKSSQNPFADKDK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggtcgtggccctggtcggccgtcccaacgtcggcaagtcgacgctcttcaac
cgcctgacccagacgcgcgacgccatcgtcgccgacttcgccggcctcacgcgcgaccgc
cattacggcaacggccgcctgggcaagcacgagttcatcgtgatcgacaccggtggtttc
gagcccgatgccggcagcggcatctacaaggaaatggccaagcagacgcggcaggccgtg
gccgaggccgacgtcgtgatcttcgtggtcgatgcccgcgaaggtctctcggcgcaagac
cacgacatcgccaacgagctgcgccggctgggcaaaccctgcgtgctggcggccaacaag
gccgaaggcatgcacgacggcaccaagctggtcgacttctacgagctgggcttcggcgac
gtgcacggcgtgtccgcggcgcacgggcagggcatgcgcgacctggtcgaactggcgctc
gagccgctgaatctgcccgacccggacgacgaggaagacgaagacgacgtcaacaagccg
atcaagctcgcagtggctggccgtcccaacgtcggcaagtccacactgatcaacacctgg
ctcggcgaagaacgcctggtggcgttcgacatgccgggcacgacgcgcgacgccatctcg
gtgccgttcgagcgcaacgggcagcgcttcgagctgatcgacaccgccggcctgcgccgc
aagggcaaggtgttcgaggcgatcgagaagttctcggtggtcaagacgctgcaggccatc
gagtcggccaacgtggtgctgctgttgctcgacgccacgcagggcgtgaccgaccaggac
gcgcacattgccggctacatcctcgaaagcggacgtgccgtggtgatcgccatcaacaag
tgggacgcggtcgacagctaccagcgcgagcagatccagcggcaaatcgaaacccggttg
ccgttcctgaaattcgcgtcattgcatttcatatcggccatcaagcgccagggcctcggc
ccggtgtggcaggccattgcccaggcccacaagtcggccacgcgcaagatgtcgacgccg
gtgctgacgcgcctgctgctggaggcggtgcaattccaagcgccccaacgcggtggcatg
taccgacccaagctgcgctatgcgcaccaaggcggcatgaatccgcccgtgatcatcatt
cacggcaattcgctggagcacgtgaccgacgcttacaagcgtttcctggaagggcgtttc
cgcaaggaattcgacctcgtgggcacgcccttgcggatccagttcaaaagctcgcaaaat
ccgtttgcggacaaggacaagtag
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