Variovorax sp. EBFNA2: RZE79_18600
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Entry
RZE79_18600 CDS
T10564
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vae03009
]
RZE79_18600
Enzymes [BR:
vae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
RZE79_18600
Ribosome biogenesis [BR:
vae03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RZE79_18600
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Cwf_Cwc_15
Motif
Other DBs
NCBI-ProteinID:
WPG35497
LinkDB
All DBs
Position
complement(3913146..3914996)
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AA seq
616 aa
AA seq
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MSSSDTDDAAKLPVEPEVKKRKRTATPKQATEVAVESVVAPAEAAGAEAEAAPKKPRAPR
KKKAVEVPAADEQLQSAAEVAPAAEAPAAVEPDVAPVVAKAATADEDEPAPVETKRPQAS
DQDDDRADDDEEDEEDEPDEEEDDLDRARRAAEREQRNALPPEPIRFSDVISGQFDADEE
SPEVPPLKRVLLPEADSPKLHKVLAQAGLGSRLEMEQLILQGRISVNNEPAHIGQRIQYG
DQVKINGKPIRYRIAPPPPRVIAYHKPVGEVVTHDDPQNRPTVFRKLPRLQQGKWQSVGR
LDLNTEGLLLFSSSGDLANQLMHPRFGLEREYAVRVLGALTAEEKKKLIEGVRLEDGMAQ
FGTIEDGGGEGSNCWYRVTISEGRNREVRRLFESVGHAVSRLIRIRYGAMVLPRGLKRGA
WMELDERDIQALFQASGGAQARPAGPSQQRGPGGPEGGGRNGRNKKRRGNNNNRNGNNVG
GMGGGQPREARGEAPIPSPLGDGRPPRGERGGRGGPNRGGGNGGPPQQQGRRGNAGPGNR
QGGQGQGQGGGGNRAPGGGAANQPDPMKTSVGYIGADSFSRQRKEQRGGPGRRGGGGGSQ
GGGGFGGPAGSRRRGR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagctcatccgacaccgacgacgcagcgaagctgccggtcgaacccgaagtcaagaag
cggaagcggacagccacgcccaagcaggcgacggaagttgcggttgaatccgtggttgcg
cccgcagaggcagcaggggccgaggccgaagcagcgccgaagaagccgcgtgcgccccgc
aagaagaaggcggtcgaggttccggctgccgatgagcaattgcagagtgcggcggaagtc
gctcctgcggccgaagctcccgcggcggtggagcccgatgtggcgcccgtggttgccaaa
gccgcgacggccgacgaagacgagcccgcaccggtcgaaacgaagcgtccccaggcgtcc
gatcaggacgacgaccgcgcggacgatgacgaggaagacgaggaagacgagcccgacgaa
gaggaagacgacctcgaccgtgcccgtcgcgccgccgagcgcgagcagcgcaatgcgctg
ccgcccgagccgatccgtttctccgacgtcatttcgggccagttcgatgccgacgaagag
agccccgaggtgccgccgctcaagcgcgtgctgctgcccgaagccgattcgcccaagctg
cacaaggtgctggcgcaggccggtctgggttcgcgcctcgagatggagcagctgatcctg
cagggccgcatctcggtcaacaacgagccggcccacatcggccagcgcatccagtacggc
gaccaggtcaagatcaacggcaagccgatccgctaccgcatcgcaccgccgccgccgcgc
gtgatcgcgtaccacaagcctgtgggcgaggtcgtcacgcacgacgacccgcagaaccgc
ccgacggtgttccgcaagctcccgcgtctgcagcagggcaagtggcaatcggtcggccgg
ctcgacctgaacaccgaaggcctgctgctgttcagcagctccggcgatctggccaaccag
ctcatgcacccgcgcttcggcctggagcgtgagtacgcggtgcgcgtgctgggcgcgctc
accgccgaagaaaagaaaaagctgatcgaaggcgtgcgcctggaagacggcatggcgcag
ttcggcaccatcgaagacggcggcggcgaaggctccaactgctggtaccgcgtgaccatt
tccgaaggccgcaaccgcgaagtgcgtcgcctgttcgagtcggtgggccacgcggtcagc
cggctcatccgcatccgctacggcgcgatggtgctgccgcgcggtctcaagcgcggtgcc
tggatggagctcgatgagcgcgatattcaagcgctgttccaggcctccggcggtgcgcag
gcgcgcccggccggtccgtcgcagcaacgtggccccggtggtccggagggcggcggtcgc
aacggccggaacaagaagcgccgtggcaacaacaacaaccgaaacggcaacaacgtcggc
ggcatgggcggcggtcagccgcgtgaagcacgcggcgaagcaccgatcccgagcccgttg
ggcgacggtcgtccgccgcgcggcgagcgcggaggacgcggtggcccgaaccggggcggc
ggcaacggcggtccgccgcagcaacaagggcgccgcggcaacgcaggccccggcaaccgc
cagggcggccaggggcaagggcagggcggcggtggcaatcgggcgccaggtggcggcgct
gcgaaccagcccgatccgatgaagacgtcggtcggctacatcggtgccgacagcttctcg
cgccagcgcaaggaacagcgcggtggtccgggacgtcgcggcggtggtgggggctcgcaa
ggcggtggcggcttcggtggcccggccggcagccgccgccgcggacgctga
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