Variovorax sp. EBFNA2: RZE79_18975
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Entry
RZE79_18975 CDS
T10564
Symbol
scpA
Name
(GenBank) methylmalonyl-CoA mutase
KO
K01847
methylmalonyl-CoA mutase [EC:
5.4.99.2
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00280
Valine, leucine and isoleucine degradation
vae00630
Glyoxylate and dicarboxylate metabolism
vae00640
Propanoate metabolism
vae00720
Other carbon fixation pathways
vae01100
Metabolic pathways
vae01120
Microbial metabolism in diverse environments
vae01200
Carbon metabolism
vae04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RZE79_18975 (scpA)
00640 Propanoate metabolism
RZE79_18975 (scpA)
09102 Energy metabolism
00720 Other carbon fixation pathways
RZE79_18975 (scpA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RZE79_18975 (scpA)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
RZE79_18975 (scpA)
Enzymes [BR:
vae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.2 methylmalonyl-CoA mutase
RZE79_18975 (scpA)
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Gene cluster
GFIT
Motif
Pfam:
MM_CoA_mutase
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WPG35568
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Position
complement(4009148..4011313)
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AA seq
721 aa
AA seq
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MSSSTPEPTYKPADLDAWAKSAAKSAPGGDVNALNWITPDGISVKPLYTAADLQGLKYTD
TLPGFEPYLRGPQATMYAVRPWTIRQYAGFSTAEESNAFYRKALAAGGQGVSVAFDLATH
RGYDSDHPRVTGDVGKAGVAIDSVEDMKILFDQIPLDKVSVSMTMNGAVLPVLAGYVVAA
EEQGVAQDQLSGTIQNDILKEFMVRNTYIFPPAPSMRIIGDIIEYTAQKMPKFNSISISG
YHMQEAGANQALELAFTLADGKEYVKTALAKGLDVDGFAGRLSFFWAIGMNFYLEVAKMR
AARLLWCRIMKEFNPKNPKSLMLRTHCQTSGWSLTEQDPYNNVVRTTIEAMAAVFGGTQS
LHTNALDEAIALPTEFSSRIARNTQLIIQEETHITNVIDPWAGSYMMEKLTQDMADAAWT
IIEEVEAMGGMTKAVDSGWAKLKIEAAAAEKQARIDSGKDVIVGVNKYKLKTEDAIDSLS
IDNVKVRDQQVARLQSIRASRDNAKVQATLDALTEAAENNTGNLLALSIDAVRARATVGE
ISDALEKSFGRHRADTQKVTGVYAAAYDSAEGWETLKTEINAFAEAQGRRPRVMISKLGQ
DGHDRGAKVVATAFADLGFDVDMGPLFQTPEECARQAIENDVHAVGVSTLAAGHKTLVPA
IIEELRKQGADDIIVFVGGVIPRQDYDFLYEAGVKGIYGPGTPIPASAKDVLEQIRAAVA
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagcacacccgaacccacctacaagccggccgatctcgacgcctgggccaag
tccgccgccaagtcggcgcccggcggcgacgtgaatgcgctgaactggatcacgcctgac
ggcatcagcgtgaagccgctgtacaccgcggccgacctgcaaggcctgaagtacaccgac
acgctgcccggcttcgagccctacctgcgcggcccgcaggccaccatgtacgcggtgcgc
ccctggaccatccgccagtacgccggcttctcgaccgccgaagaatcgaacgcgttctac
cgcaaggcgctggccgccggcgggcagggcgtgagcgtggccttcgacctggccacccac
cgcggctacgacagcgaccatccgcgcgtgaccggcgacgtcggcaaggccggcgtggcg
atcgattcggtcgaggacatgaagatcctgttcgaccagatcccgctcgacaaggtctcc
gtgtcgatgacgatgaacggcgcggtgctgccggtgctggcgggctacgtggtcgcggcc
gaagagcagggcgtggcgcaagaccagctgagcggaaccatccagaacgacatcctcaag
gagttcatggtccgcaacacgtacatctttccgccggcgccgagcatgcggatcattggc
gacatcatcgagtacacggcgcagaagatgccgaagttcaactcgatcagcatcagcggc
tatcacatgcaggaagccggcgccaaccaggcgctggagcttgcgttcacgctggccgac
ggcaaggaatacgtgaagaccgcgctggccaagggcctcgacgtcgacggctttgccggg
cgcctgagcttcttctgggccatcggcatgaacttctatcttgaagtggcgaagatgcgc
gcggcgcgtctgctgtggtgccgcatcatgaaggagttcaaccccaagaaccccaagagc
ctgatgctgcgcacgcactgccagacctcgggctggagcctcaccgagcaggacccgtac
aacaacgtggtgcgcacgaccatcgaggcgatggccgcggtgttcggcggcacgcagtcg
ctgcacaccaacgcgctcgacgaagccattgcgctgcccaccgagttcagctcgcgcatc
gcgcgcaacacgcagctcatcatccaggaagagacgcacatcacgaacgtgatcgacccc
tgggccggcagctacatgatggaaaagctcacgcaggacatggccgacgccgcctggacc
atcatcgaagaggtcgaggccatgggcggcatgaccaaggctgtcgacagcggctgggcc
aagctcaagatcgaagccgccgccgccgagaagcaggcgcgcatcgattcgggcaaggac
gtgatcgtcggcgtcaacaagtacaagctcaagaccgaagacgcgatcgacagcctgtcg
atcgacaacgtcaaggtgcgcgaccagcaggtggcgcgcctgcagagcattcgcgcctcg
cgcgacaacgccaaggtgcaggccacgctcgacgcgctcaccgaagccgccgaaaacaac
accggcaacctgctagcactgagcatcgacgcggtgcgtgcgcgcgccaccgtcggcgag
atttccgacgccctcgaaaaatcattcggccgccatcgcgccgacacgcaaaaggtgacc
ggtgtgtacgctgccgcctatgactcggccgaaggctgggaaacgctcaagaccgagatc
aacgcctttgctgaagcacaaggccgccgtccgcgcgtgatgatttccaagcttgggcaa
gacgggcatgaccgcggcgcgaaggtggttgccaccgcgttcgccgatctgggcttcgac
gtcgacatgggcccgctgttccagacgcccgaagagtgcgcgcgccaggccatcgagaac
gacgtgcatgccgtgggggtgagcacgctcgccgcgggccacaagacgctggtgccggcc
atcatcgaagagctgcgcaagcagggcgcggacgacatcatcgtcttcgtcggcggcgtg
attccgcgccaggactacgacttcctctacgaagccggcgtgaagggcatctacggcccg
ggcacgcccattccggccagcgccaaggacgtgctggagcagatccgcgcggccgtcgcc
gcctga
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