Variovorax sp. EBFNA2: RZE79_19540
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Entry
RZE79_19540 CDS
T10564
Name
(GenBank) type II and III secretion system protein family protein
KO
K02280
pilus assembly protein CpaC
Organism
vae Variovorax sp. EBFNA2
Pathway
vae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RZE79_19540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vae02044
]
RZE79_19540
02035 Bacterial motility proteins [BR:
vae02035
]
RZE79_19540
Secretion system [BR:
vae02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
RZE79_19540
Bacterial motility proteins [BR:
vae02035
]
Pilus system
Pilus assembly proteins
RZE79_19540
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
BON
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
WPG40755
LinkDB
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Position
complement(4142852..4144297)
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AA seq
481 aa
AA seq
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MAADVVATAPVTAAAMPAPAALAAAAPAAPASRRCTAIIPDSEPTYAVLGKSVVIPLRVR
AVRIVVSGQPQGQAAAQAATPQGAAAPPVPKSEGVGDIEVTLLSPTDLFFRGRQAGSMNV
VLQSADGTCHIKDVIVTIDPGALQAKLAELMPEERGIRVRSAERSIVLTGEISDALKLDD
VMSLASAYGADGKKVVNLLRVGAPQQVMLEVKIAEVSKTLLDRLGARVGISRMSGGGLHN
YSLISNFLSAGGGLVEALRIGRGAVTIDGQKDDGLVRVLAEPNIMAISGQNASFLSGGKI
FIPVSQTGSGANGSTITLEEKEFGIGVKFMPTVLNGDRINLKMVSEVSDLTQTGSPFTTV
GGVTSVLPSLTVRRADTTVQLNDGQSFVIAGLIKSNATEAVKRYPGLGEVPVMGALFRST
EFQNEQTELMFVITPRLVRPLAEPPRVPTDNHVLPSRAEMYLNGALESSTPAPAAPASQT
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgtcgtggcaaccgccccggtcacggccgccgccatgcctgcgcctgcg
gcactggctgcggcagcgcctgcggccccggccagccggcgctgcaccgccatcatcccg
gacagcgagccgacctatgccgtgctcggcaagtcggtggtcattccgttgagggtgcgt
gccgtgcgcatcgtggtcagcggccagcctcagggccaggcggccgcgcaggcggcaacg
ccgcagggcgcggcggcgccccccgtgcccaagagtgaaggcgtcggcgacatcgaggtc
acgctgctgagcccgaccgacctgttcttccgcggccgccaggccggctcgatgaacgtg
gtgctccagagtgccgacggcacctgtcacatcaaggacgtgatcgtcaccatcgatccc
ggcgcgctgcaggccaagctggccgagttgatgcccgaagagcgtggcatccgcgtgcgc
agcgccgagcgctccatcgtgctcaccggcgagatcagcgacgcgctgaagctggacgac
gtgatgagcctggcctcggcctacggcgccgacggcaagaaggtggtgaacctgctgcgc
gtcggcgcaccccagcaggtgatgctcgaagtgaagatcgccgaggtcagcaagaccctg
ctcgatcggctgggtgcgcgtgtcggcatctcgcgcatgagcggcggcggcctgcacaac
tactcgctgatctccaacttcctgagcgcgggcggcggcctggtcgaggcgctgcgcatc
ggccgcggcgcggtgaccatcgacggccagaaggacgacggcctggtgcgcgtcctggcc
gagcccaacatcatggccatcagcggccagaacgccagcttcctgtcgggcggcaagatc
ttcattccggtgtcgcaaaccggcagcggcgccaacggaagcaccatcacgctggaagag
aaggagttcggcatcggcgtgaaattcatgccgacggtgctcaacggcgaccgcatcaac
ctgaagatggtgtcggaggtgtcggacctgacgcagaccggctcgcccttcaccacggtc
ggcggcgtgacgtccgtgctgccgtcgctcacggtgcggcgcgccgacaccacggtgcag
ctcaacgacgggcagagcttcgtcatcgccggcctgatcaagagcaacgcgacggaggcg
gtcaagcgctatccgggcctgggcgaagtgccggtgatgggcgcgctgtttcgcagcacc
gagttccagaacgagcagaccgagctgatgttcgtcatcacgccgcgcctggtgcgtccg
ctggccgagccgccgcgcgtgccgaccgacaaccacgtgctgcccagccgcgccgagatg
tacctgaacggcgccctcgaaagcagcaccccggccccggccgccccggccagccaaacc
ccgtga
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