Variovorax sp. EBFNA2: RZE79_19585
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Entry
RZE79_19585 CDS
T10564
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
vae Variovorax sp. EBFNA2
Pathway
vae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RZE79_19585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vae03021
]
RZE79_19585
Transcription machinery [BR:
vae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RZE79_19585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
HTH_11
HTH_20
HTH_24
Xre-like-HTH
HTH_Tnp_ISL3
HTH_28
PhyR_sigma-like
HTH_29
GAAD
DUF6031
DUF722
HTH_40
WHIM1
HTH_Tnp_4
RovC_DNA-bd
DUF1804
Maf_N
Motif
Other DBs
NCBI-ProteinID:
WPG35688
LinkDB
All DBs
Position
4151797..4152297
Genome browser
AA seq
166 aa
AA seq
DB search
MPSADTRTVQALYTEHHGWLSTWLRRRLGCAHSAADLAQDTFVRVLLRPQVLPTLREPRA
YLTTLAKGVVSEHWRRQALERAYIEALALAPEALALSPEERLQLLQTLDAIDAMLDGLPH
KAREAFVLSQLEGLTYAQIAERLAISERTVKRHMALGFEHCLALVE
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgccgacacccgcaccgtgcaggcgctctacacggagcaccacggctggctc
agcacgtggctgcgccggcgcctgggctgtgcgcacagcgccgccgacctggcgcaggac
accttcgttcgcgtgctgctgcgcccacaggtgctgcccacgttgcgtgagccgcgcgcc
tacctgacgacgctggccaagggcgtggtcagcgaacactggcgccgccaggcgctggag
cgcgcgtacatcgaggcgctcgcgctggcgcccgaggcgctggcgctgtcgcctgaagag
cgcctgcagttgctgcagacgctggacgccatcgacgcgatgctggacggcctgccgcac
aaggcgcgcgaagccttcgtgctgtcgcagctcgaaggcctgacctacgcacagatcgcc
gagcgcctggcgatcagcgaacgcaccgtcaagcgccacatggccctgggcttcgagcat
tgcctggcgttggtggaatga
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