Variovorax sp. EBFNA2: RZE79_20005
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Entry
RZE79_20005 CDS
T10564
Name
(GenBank) LysR family transcriptional regulator
Organism
vae Variovorax sp. EBFNA2
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
WPG35768
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Position
4247294..4248235
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AA seq
313 aa
AA seq
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MSITIKQLQHFVAAAHTGQVSRAAQRCYVSQPSLTTSLKNLESTLKVQLFTRHSDGLRLT
VQGEGFLRHAEHMLHTLDAAVEETRNSVSAVEGRVQIAITDTVSEYMLPKIIGAMRRQLP
LVEFEPVERNRLEIENGLRSGEFDLAVVLVSNLSRAPDIRRENLLKSERRLWTSFDHPLV
TQKSVSLREIAQMPFVLLDMDEHVDTVSRYWSAMKLKPKVVFRTKSIEAVRSLVAQNVGV
TILSDLVFRPWSHDGGRIRRTVVSSAVPSMDLGLAYRRGAVLSEATAASASTLRLLAKTL
TRESQPRMDDEPQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataacgatcaagcagctgcaacacttcgtcgctgcagcgcacacggggcaggtg
tcccgcgcagcccagcgctgctatgtgagccagccgtcgctgaccacgtcgctcaagaac
ctggagtcgacgctgaaggtgcagctctttacgcggcactccgacgggctgcggctcacg
gtgcagggcgagggctttcttcggcatgcggagcacatgctgcacacgctcgatgcggcg
gtggaggaaacgcgcaactcggtgtccgcggtcgagggacgggtgcagatcgccatcacc
gacaccgtgtccgagtacatgctgccgaagatcatcggcgcgatgcgcaggcaactgccg
ctggtcgagttcgagcctgtggagcgcaaccggctcgagatcgagaacggcctgcgcagc
ggcgaattcgacctggccgtggtcctggtgtcgaacctctcgcgcgcgccggacatccgt
cgcgagaacctgctgaagtcggaacgccgcctgtggacgtcgttcgaccatccgctggtg
acgcagaagtcggtgtcgctgcgcgagatcgcgcagatgccctttgtgctgctggacatg
gacgagcacgtggacaccgtgagccgctactggagcgcgatgaagctcaagcccaaggtc
gtgttccgcaccaaatcgatcgaggccgtgcgcagcctcgttgcacagaacgtgggcgta
acgatcttgtcggatctggtgtttcgcccgtggtcgcacgacggtgggcgcattcgcagg
acggtggtgtcgagcgcggtgccctcgatggacctgggtctggcctaccggcgcggggcc
gttctgtccgaggccacggcggcctctgcgagcaccttgcggttgctggccaagacactc
acgagagagtcacagccgcgcatggacgacgagccgcagtag
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