Variovorax sp. EBFNA2: RZE79_21655
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Entry
RZE79_21655 CDS
T10564
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
vae Variovorax sp. EBFNA2
Pathway
vae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RZE79_21655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vae03021
]
RZE79_21655
Transcription machinery [BR:
vae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RZE79_21655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_23
TnsD
Sigma70_ECF
HTH_7
LacI
HTH_31
HTH_11
GerE
HTH_24
DUF2774
SASP
Motif
Other DBs
NCBI-ProteinID:
WPG36084
LinkDB
All DBs
Position
complement(4601471..4601974)
Genome browser
AA seq
167 aa
AA seq
DB search
MSAAEAAFQQVHTLYSDHHGWLQSWLRKKLGNSCDAADLAQDTFARLLIARNPEVIAQPR
AYLTSVAKNILVNWYQRQALERAYLEALALMPEPEAPSPEQRLVILQTLHEIDAMLDALK
PLARRAFLLSQLDGMKYEDIARELGVSLVTVKRYMQQGFRGCLAVMG
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgccgaagccgccttccagcaagtccacaccctctacagcgaccaccacggc
tggcttcagtcgtggctgcgcaagaagctcggcaattcgtgtgacgcggccgacctggcg
caggacaccttcgcgcggctgctgatagcgcgcaaccccgaggtcattgcgcagccgcgc
gcctacctcacgagcgtggccaagaacatcctcgtgaactggtaccagcgccaggcgctg
gagcgcgcctacctcgaagcgctggccctgatgcccgagcccgaggcgccgtcgcccgag
cagcggctggtgattttgcagacgctgcacgagatcgacgccatgctcgacgccctcaag
ccgctcgcacgccgggccttcctgctgtcgcagctcgacggcatgaagtacgaggacatc
gcgcgcgagctgggcgtgtcgctcgtcacggtcaagcgctacatgcagcagggcttccgg
ggctgcctggcggtgatgggatga
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