Variovorax sp. EBFNA2: RZE79_22065
Help
Entry
RZE79_22065 CDS
T10564
Name
(GenBank) Ada metal-binding domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RZE79_22065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vae03000
]
RZE79_22065
03400 DNA repair and recombination proteins [BR:
vae03400
]
RZE79_22065
Enzymes [BR:
vae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RZE79_22065
Transcription factors [BR:
vae03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RZE79_22065
DNA repair and recombination proteins [BR:
vae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RZE79_22065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WPG36164
LinkDB
All DBs
Position
4682068..4683681
Genome browser
AA seq
537 aa
AA seq
DB search
MSTAHAPSEVLESDACYLAMKTHDARFDGSFFTAVTSTGIYCRPVCRVKLPRRENCRFFR
HAAQAEAAGFRPCLRCRPELAPRAASWSTEDASRILALQAARLIDEPDAWSEEGPGAAQI
AARLGVSDRHLRRIFEAQFGVSPLQYLQTRRLLAAKQLIADTRLPMTQVALASGFASVRR
FNAAFVAHYGLNPSALRRAGGTEGGEGKAIEVRLGFRPPYDANAMLGFFARRALRGVETV
HTADGKEPAKGSTPTYVRLARTLRVQQGGQTHAGWLQLRFDLEREQVLLAVSDSLAAVLP
IVISRARALFDLDAEPMAINAALHAAFPHGDGLRVPGTVDGFELAVRAVLGQQITVVAAR
TLGSRLVEAFGDAIDTPIDGLTRLFPTPAALAAASGDALGQLGIVRQRQAALQAIAREVA
SGRLALHAGADVPSTLAALQELPGIGAWTAQYIAMRALRWPDAFPAGDVALQKALGVTTA
RAAAEASQAWRPWRSYAVLRAWHTPPAPPAPSEPASAMTPIASSSDLATAGLVPEGP
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgcccacgccccctccgaagtgctcgagagcgacgcctgctacctggcgatg
aagacgcacgacgcgcgcttcgacggctcgttcttcacggccgtgacctccaccggcatt
tactgccggccggtctgccgcgtcaagctgccgcggcgcgagaactgccgcttcttccgc
cacgcggcccaggccgaggcagcaggctttcggccctgcctgcgctgccggcccgaactg
gcgccgcgcgcggccagttggtcgaccgaagatgcctcgcgcatcctcgcgctgcaggcg
gcgcggctcatcgacgagcccgacgcctggtccgaagaaggccccggcgcggcgcagatc
gcggcgcgcctgggcgtgagcgaccgccacctgcggcgcatcttcgaggcgcagttcggc
gtgtcgccgctgcagtacctgcagacgcgccgcctgctggccgccaagcagctcattgcc
gacacgcgcctgccgatgacgcaggtggcactggccagtggcttcgcgagcgtgcggcgc
ttcaacgcggccttcgtggcgcactacggactcaacccgagcgcactgcgccgcgcgggc
ggcaccgagggcggcgaaggcaaggcgattgaagtgcggctgggctttcgcccaccctac
gacgcgaacgccatgctcggcttcttcgcgcggcgcgcactgcgcggcgtcgagaccgtg
cacaccgccgacggcaaggaacccgccaagggcagcacgccgacctatgtgcggctggcg
cgcacgctgcgcgtgcagcaaggcgggcagacgcacgccggctggctgcagttgcgcttc
gacctcgagcgcgaacaggtgctgctggccgtgagcgattcgctggccgcggtactgccg
atcgtcatcagccgcgcacgcgcgctgttcgacctcgacgcggagccgatggcgatcaac
gccgcactgcacgccgcctttccgcatggcgacgggctgcgcgtgccgggcacggtcgac
ggcttcgagctcgcggtgcgcgcggtgctgggccagcagatcactgtggtcgcggcgcgc
acgctgggctcgcggctggtcgaggccttcggcgacgcgatcgacacccccatcgacggc
ctgacccgcctgttccccacgccagccgcgctggcagcggccagtggcgatgcgctcggg
cagctgggcatcgtgcgccagcggcaggccgcgctgcaggccattgcgcgcgaagtggcc
tcgggccggctggcgctgcatgcgggcgccgacgtgccctcgaccctcgcggcgctgcag
gaactgcccggcatcggcgcctggaccgcgcagtacatcgcgatgcgcgccctgcgctgg
cccgacgcctttcccgccggcgacgtggccctgcagaaggcgctgggcgtcaccaccgcg
cgtgccgcggccgaggcctcgcaggcctggcggccctggcgcagctacgcggtgctgcgc
gcgtggcacacaccgcccgcaccacccgcaccttccgagccggcatcggcgatgacgccg
atcgcttcttcttccgacctcgcaacggcaggcctcgtgcctgaaggaccatga
DBGET
integrated database retrieval system
