Variovorax sp. EBFNA2: RZE79_22805
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Entry
RZE79_22805 CDS
T10564
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00061
Fatty acid biosynthesis
vae00071
Fatty acid degradation
vae01100
Metabolic pathways
vae01212
Fatty acid metabolism
vae02024
Quorum sensing
vae04146
Peroxisome
Module
vae_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RZE79_22805
00071 Fatty acid degradation
RZE79_22805
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RZE79_22805
09145 Cellular community - prokaryotes
02024 Quorum sensing
RZE79_22805
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vae01004
]
RZE79_22805
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vae04147
]
RZE79_22805
Enzymes [BR:
vae01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RZE79_22805
Lipid biosynthesis proteins [BR:
vae01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RZE79_22805
Exosome [BR:
vae04147
]
Exosomal proteins
Exosomal proteins of breast milk
RZE79_22805
Exosomal proteins of breast cancer cells
RZE79_22805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF1003
Motif
Other DBs
NCBI-ProteinID:
WPG36299
LinkDB
All DBs
Position
complement(4849732..4851576)
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AA seq
614 aa
AA seq
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MATPPSFAPVPADIDTVPRLFRHAVATRGDAVMLRQKELGIWRAYTYAEVGLIVDEMARG
LAALGLRPGDVMSVLSNTCREWLWMDLAGLTAGAVVNGIYPTDAATQVEFLCQDSGSTLL
VVENEEQLDKFLEVQARLPAVRHVIVFDMEGLARLDDARVLSLDALRELGRTHRATQPAL
LDERIASRGPTDLAVLVYTSGTTGRPKGAMISHANVMAASRTLQAFLPRTSLRERAAFLP
LCHVSERIFGEYYALLAGQTLNFVEDPETIFDNIREIQPDVFMAVPRIWEKLYSSVSTAM
REATRLEQWACRRALAVGERVAGHRERREAVPTLLRARHWLARKLVLDNLRSLMGLGRVE
LAITGAAPISADLIRWYMALGIELNELWGMTEVTGAATCNPQGRSRPGSIGLPLPGSEVR
LSPQGELQVRGGQVFMGYLNLPEKTAEAFEDGWLRTGDVGRMDDDGYFYITDRMKDIIIT
AGGKNVTPSEWENQLKFSPYVTDAVVIGDKRAYLSCLVMIDQDNVEQWAQERSVAFSDYR
SLTRSHEVVSLIAEEIEKVNRHFARVEQIKQFRLLENRLSAEDEELTPTMKLKRSLVNRK
YAVLIDSMYEDRAA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacccccttccttcgcgcccgttccggcggacatcgacaccgtgccgcgcctg
ttccgccatgcggtggccacgcgcggcgacgcggtgatgctccggcagaaggaactcggc
atctggcgcgcctacacctatgccgaggtcgggctgatcgtcgatgagatggcccgcggg
ctggccgcgctggggctgcggcccggcgacgtgatgtcggtgctatcgaacacctgccgc
gaatggctgtggatggacctcgccggcctcacggcgggtgcggtggtcaacggcatctac
ccgaccgatgcggccacgcaggtcgagttcctgtgccaggactctggctccacgctgctg
gtggtggagaacgaggagcagctcgacaagttcctcgaggtgcaggcgcggctgcccgcg
gtgcgccacgtgatcgtgttcgacatggaggggctggcgcggctcgacgacgcacgcgtg
ctctcgctcgacgcgctacgtgagctgggccgcacgcatcgggccacacagcccgcgctg
ctcgacgagcgcatcgcgagccgcggcccgaccgacctcgcggtgctggtctacacctcg
ggtaccaccgggcggcccaagggcgcgatgatctcgcacgccaacgtgatggccgcgagc
cgcacgctgcaggccttcctgccgcgcacctcgctgcgcgagcgtgccgccttcctgccg
ctgtgccatgtgtcggagcgcatcttcggcgagtactacgcgctgctggccggccagacg
ctgaacttcgtcgaggatcccgagaccatcttcgacaacatccgcgagatccagcccgac
gtgttcatggccgtgccgcgcatctgggagaagctctactcgagcgtgtcgaccgcgatg
cgcgaggccactcggctcgagcagtgggcctgccggcgcgcgctcgcggtgggcgagcgc
gtggccgggcaccgcgagcggcgcgaggccgtgccgacgctgctgcgcgcacgccactgg
ctggcgcgcaagctggtgctggacaacctgcgcagcctcatgggcctgggccgcgtcgag
ctggccatcaccggcgcggcgccgatctcggccgacctgatccgctggtacatggcgctg
ggcatcgagctcaacgagctctggggcatgaccgaggtgaccggcgccgccacctgcaac
ccgcaggggcgcagccgcccgggcagcatcggcctgccgctgccgggctcggaggtgcgg
ctgtcgccgcagggcgagctgcaggtgcgcggcggccaggtcttcatgggctacctcaac
ctgcccgagaagacggccgaggccttcgaggacggctggctgcgcaccggcgacgtgggc
cgcatggacgacgacggctatttctacatcaccgaccggatgaaggacatcatcatcacg
gcgggcggaaagaacgtcacgccctcggagtgggagaaccagctcaagttcagcccctac
gtgaccgacgcggtggtcatcggcgacaagcgcgcctacctgagctgcctggtgatgatc
gaccaggacaacgtcgagcagtgggcgcaggagcgttcggtggccttctcagactaccgc
tcgctcacccgcagccacgaggtcgtgagcctgatcgccgaggagatcgagaaggtcaac
cggcacttcgctcgggtcgagcagatcaagcagttccgtctgctcgagaaccgcctgagc
gcggaggacgaggagctcacgccgaccatgaagctcaagcgctcgctggtcaaccgcaaa
tacgcggtgctgatcgattcgatgtacgaggaccgcgcagcctga
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