Variovorax sp. EBFNA2: RZE79_23745
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Entry
RZE79_23745 CDS
T10564
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RZE79_23745 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vae01007
]
RZE79_23745 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vae03016
]
RZE79_23745 (lysS)
Enzymes [BR:
vae01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RZE79_23745 (lysS)
Amino acid related enzymes [BR:
vae01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RZE79_23745 (lysS)
Transfer RNA biogenesis [BR:
vae03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RZE79_23745 (lysS)
Prokaryotic type
Other AARSs
RZE79_23745 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WPG36476
LinkDB
All DBs
Position
5045761..5047323
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AA seq
520 aa
AA seq
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MSDHLTPPIPTPAAVPSSAPAVDDNQLIVERREKLKLLRTAQTEGKGVAFPNDFKPGHRA
AALVAQHDGTEADALEAQAVSVSVAGRMMLKRVMGKASFATVQDATGRIQLYVTRDAIGE
EAYADFKRWDLGDILGAEGTLMKTKTGELSVKVTKLRLLTKSLRPLPDKFHGMADQEQKY
RQRYVDLITDESARVRFTARSKAVSALREFMVSHDFLEVETPMLHPIPGGANAKPFKTHH
NALDQEMFLRIAPELYLKRLIVGGFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNY
RDLMDFTETLIRTIADKAVGTQQLTYGGKPVDLTQPFERLTIREAILKHTEAGDGVDDTT
WLINALRKLGLSEEKDKLSQRSLASLQVMYFEETVEEKLWQPTFIMEHPTEISPLARAND
ERPEVTERFELYITGREFGNGFSELNDAEDQAARFNAQVAAKDGGDDEAMFYDHDFVRAL
EYGMPPTGGCGIGIDRLMMLLTDSPSIRDVILFPALRRES
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcacctgacccctcccattcccacgcccgctgcagttccttcctcggcgccc
gccgtcgacgacaaccagctcatcgtcgaacgccgcgaaaagctcaagctgctgcgcacg
gcgcagaccgaaggcaagggggttgcgttcccgaacgacttcaaacccggccaccgcgct
gcggcgctggtcgcgcagcacgacggcaccgaggccgacgcgctcgaagcgcaggccgtt
tccgtgagtgtggccggccgcatgatgctcaaacgcgtgatgggcaaggccagcttcgcg
accgtgcaggacgccaccggccgcatccagctgtacgtgacgcgcgacgccatcggcgaa
gaggcgtacgccgacttcaagcgctgggacctgggcgacatcctcggcgccgaaggcacg
ctgatgaagaccaagaccggcgagctgtcggtcaaggtgaccaagctgcgcctgctcacc
aagagcctgcgcccgctgcccgacaagttccacggcatggccgaccaggagcagaagtac
cgccagcgctacgtcgacctgatcaccgacgagtcggcccgcgtgcgcttcaccgcacgc
agcaaggccgtgagcgcgctgcgcgagttcatggtgtcgcacgacttcctcgaggtcgag
acgcccatgctgcacccgattccgggcggcgccaacgccaagcccttcaagacgcaccac
aacgcgctcgaccaggaaatgttcctgcgcattgcgcccgagctgtacctcaagcgcctg
atcgtcggcggcttcgagcgcgtgttcgaaatcaaccggagctaccgcaacgagggcatc
tcggtgcggcacaaccccgagttcacgatgatggagttctacgcggcctactggaactac
cgcgacctcatggacttcaccgagacgctgatccgcaccatcgccgacaaggccgtgggc
acgcagcagctcacctacggcggcaagccggtcgacctgacccagcccttcgagcgcctg
acgatccgcgaagcgatcctgaagcacaccgaggcaggtgacggggtcgatgacaccacc
tggctcatcaacgccctgcgcaagctcggcctgagcgaagaaaaagacaagctctcgcag
cgcagcctcgccagcctgcaggtgatgtacttcgaagagaccgtcgaagagaagctctgg
cagccgaccttcatcatggagcacccgaccgagatctcgccgctggcgcgcgccaacgac
gagcgccccgaggtcaccgagcgcttcgagctctacatcacaggccgcgaattcggcaac
ggcttcagcgagctcaacgacgccgaagaccaggccgcgcgcttcaacgcgcaggtggct
gccaaggacggcggcgacgacgaagccatgttctacgaccacgacttcgtgcgcgcgctc
gaatacggcatgccgcccaccggcggctgcggcatcggcatcgaccgcctcatgatgctg
ctgaccgattcgccgagcattcgcgacgtgattcttttcccggcgctgcgccgggaaagc
tga
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