Variovorax sp. EBFNA2: RZE79_23795
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Entry
RZE79_23795 CDS
T10564
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
vae Variovorax sp. EBFNA2
Pathway
vae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RZE79_23795 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vae03400
]
RZE79_23795 (recO)
DNA repair and recombination proteins [BR:
vae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RZE79_23795 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RZE79_23795 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
DUF6423
Motif
Other DBs
NCBI-ProteinID:
WPG36486
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Position
complement(5056438..5057211)
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AA seq
257 aa
AA seq
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MAAAHRVSHEPAYVLHRYDWSESSLILEVFTRHHGRIALVAKGAKRPSSNFRPVLLPLQP
LQLNYGGDAEIRTLKGAEWMGGHVMPTGEALLSGYYVNELLLRLLARDDAHEALFDAYAG
VVQVLAGDHAGAQAATQAAALRAFELLLLRSVGLLPSLDVQTLTLEPLAARTRYSLVPEA
GLRQAAKDEAALAGADWRALQDVLDDRTPFTATLREVATMSVGSNSALRNQLRTLLNYHC
GVTTLRTRQMMRDLQAL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtggccgccgctcatcgcgtttcgcatgaaccggcctatgtgctccatcgctacgactgg
agcgagtcgagcctgatcctcgaggtcttcacccgccaccacgggcgcatcgcgctcgtg
gccaagggggcgaagcggccgagttccaatttccgtccggtgctgctgccgctacagccg
ctgcagctcaactacggtggcgacgccgagatccgcacgctgaaaggcgccgagtggatg
ggcggccacgtcatgccgaccggcgaggcgctgctctcgggctactacgtcaacgaactg
ctgctgcgcctgctggcgcgcgacgacgcgcatgaggcgctgttcgacgcctatgccggc
gtggtgcaggtgttggccggcgaccacgcaggcgcccaggccgcaacacaggccgccgcg
ctgcgcgccttcgagctgctgctgctgcgttcggtcggcctgctgccctcgctcgacgtg
cagacgctcaccctggagccgctggcggcccgcacccgctacagcctcgtgcccgaagcc
ggcctgcggcaggcggccaaggacgaggctgcgctggccggcgccgactggcgggcgctg
caagacgtgctcgacgatcgcacgccgttcaccgccaccctgcgcgaggtcgcgacgatg
agcgtcggcagcaacagtgccctgcgaaaccagctgcgcaccttgctcaactaccattgc
ggcgtgaccacgctgcgcacgcggcaaatgatgagagacctgcaagcgctctag
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