Variovorax sp. EBFNA2: RZE79_24190
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Entry
RZE79_24190 CDS
T10564
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
vae Variovorax sp. EBFNA2
Pathway
vae02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RZE79_24190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vae02000
]
RZE79_24190
Transporters [BR:
vae02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RZE79_24190
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Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
AAA_16
SMC_N
AAA_29
AAA_22
Sigma54_activat
Mg_chelatase
AAA_5
NACHT
AAA_23
nSTAND3
nSTAND1
RsgA_GTPase
AAA_19
NB-ARC
DUF3987
AAA_18
DUF87
PRK
Motif
Other DBs
NCBI-ProteinID:
WPG36558
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Position
complement(5150587..5152206)
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AA seq
539 aa
AA seq
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MTQQAPVLSVRDLAIALPRGGDRPHAVDKVSFDVPPGKIVCLLGESGSGKSVIANAVMGL
LPAGLAPVRGTIELQGENLLAAPTSRLRQLRGPSMAMVFQEPMTALNPVMTCGAQIDEML
AQHVHMGAAERRQKILAIMARVRLPEPERIYASYPHQLSGGQRQRIVIAMALILKPALLI
CDEPTTALDVTTQAEILKLILELQTENGTAVLFITHDFGVVAEIADEVVVLQLGAMIEKD
DKMAVLTAPREPYTKMLLDAVPELSAHKRPPVVDAYPLLNAVNICKTYVTGSWPGKRRTV
KAARDVSLEVRPGETVGIVGESGSGKSTVARCIARLIDPTSGDIFADGRSVAHVRGRALS
PFRRTVQVIFQDPYRSLNPRQTVGDSIIEGPVNFGTPHGQAWARAEELMRLVRLSPDALR
RYPSEFSGGQRQRISIARALACDPKVLIADEAVSALDVSVQAQILRLLDEIQQRLKIGIL
FITHDLRVASQICDSVLVMSQGEIVERGDVKDVFFAPQHDYTRKLLAAAPGRDFAFARS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaacaagcccctgtcctttccgttcgcgaccttgccatcgcattgccgcgcggc
ggcgaccggccgcatgcggtcgacaaggtgtccttcgacgtgccgcccggcaagatcgtc
tgcctgctcggcgaatcgggctcgggaaaatcggtcatcgccaatgcggtgatgggcctg
ctgcccgcggggctcgcgccggtgcgcggcaccatcgaactgcagggcgagaacctgctc
gccgcgccgacgtcgcgcctgcgccagttgcgcggcccgtcgatggcgatggtgttccag
gagccgatgaccgcgctcaaccccgtgatgacctgcggcgcgcagatcgacgaaatgctg
gcgcagcacgtgcacatgggcgcggccgagcggcggcagaagatccttgcgatcatggcg
cgcgtgcggctgccggagcccgagcgcatctacgcctcgtacccgcaccagctctcgggc
gggcagcgccagcgcatcgtgatcgcgatggcgctcatcctcaagcccgcgctcctgatc
tgcgacgagccgaccaccgcgctcgacgtgaccacgcaggccgagatcctcaagctcatc
ctcgaactgcagaccgagaacggcacggccgtgctcttcatcacgcacgacttcggcgtg
gtggccgagattgccgacgaggtggtggtgctgcagctcggcgccatgatcgagaaggac
gacaagatggcggtgctcacggcgccgcgcgagccctacacgaagatgctgctcgatgcg
gtgcccgagctttccgcgcacaagcgcccaccggtcgtggacgcgtatccgctgctcaac
gcggtgaacatctgcaagacctacgtcacgggcagctggcccggcaagcgccgcacggtg
aaggccgcgcgcgacgtctcgctcgaagtgcgcccaggagaaaccgtgggcatcgtgggc
gaatcgggctcgggcaagtcgacggtggcgcgctgcatcgcgcggctgatcgacccgacc
tcgggcgacatctttgccgacggccggtcggtcgcgcatgtcagggggcgcgcgctgtcg
ccgttccggcgcacggtgcaggtgatcttccaggacccgtaccgctcgctcaacccgcgc
cagaccgtgggcgactccatcatcgaagggccggtgaacttcggcacgccgcacggccag
gcctgggcgcgcgccgaagagctgatgcgtctggtgcgcctgtcgcccgacgcgctgcgc
cgctacccgagcgagttctcgggcggccagcgccagcgcatctcgattgcgcgcgcgctg
gcctgcgaccccaaggtgctgatcgccgatgaggccgtgtcggcgctcgacgtgtcggtg
caggcgcagatcctgcggctgctcgacgagatccagcagcggctgaagatcggcattctc
ttcatcacccacgacctgcgcgtggccagtcagatctgcgacagcgtgctcgtgatgagc
cagggtgaaatcgtggaacgcggtgacgtgaaggacgtgttcttcgcgccgcagcacgac
tacacgcgcaaactgctggctgccgcgccgggccgcgactttgcctttgcacgcagctga
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