Variovorax sp. EBFNA2: RZE79_24210
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Entry
RZE79_24210 CDS
T10564
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00020
Citrate cycle (TCA cycle)
vae00480
Glutathione metabolism
vae00720
Other carbon fixation pathways
vae01100
Metabolic pathways
vae01110
Biosynthesis of secondary metabolites
vae01120
Microbial metabolism in diverse environments
vae01200
Carbon metabolism
vae01210
2-Oxocarboxylic acid metabolism
vae01230
Biosynthesis of amino acids
vae04146
Peroxisome
Module
vae_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vae_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RZE79_24210
09102 Energy metabolism
00720 Other carbon fixation pathways
RZE79_24210
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RZE79_24210
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RZE79_24210
Enzymes [BR:
vae01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
RZE79_24210
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GFIT
Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
WPG36562
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Position
5156282..5158516
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AA seq
744 aa
AA seq
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MSTKQPTIVYTLTDEAPLLATYAFLPIVRAFTAPAGINVTTSDISVAARILGEFPEFLSD
DQKVPDNLAELGKLTLRPDANIIKLPNISASVSQLKSAIKELQGKGYKIPDYPENPTSDE
DKDIRARYNKCTGSAVNPVLREGNSDRRAPRAVKEYARKNPHSMAEWSQASRSHVSHMHG
GDFYHGEKSMTLDRARNVKMELITKSGKTIVLKPKVALLDREIIDSMFMSKKALLAFYEK
EIEDAHKTGVMFSLHVKATMMKVSHPIVFGHCVKIFYKEAFEKHGKLFDELGINVNNGMV
DLYNKIATLPQSTQDEIKRDLHACHEGRPELAMVDSAKGITNFHSPNDVIVDASMPAMIR
NGGKMWGADGRLKDVKAVMPESTFARIYQEIINFCKWHGAFDPKTMGTVPNVGLMAQKAE
EYGSHDKTFEIAEDGVANITDLDTGEVLMSEDVEKGDIWRMCQVKDAAIRDWVKLAVNRA
RNSGMPVVFWLDAYRPHEAQLITKVKMYLHEHDTTGLDIQIMSQVRAMRYTLERVVRGLD
TISATGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEEN
HLRWDSLGEFLALAVSLEDLGLKTGNAQAKILSKTLDAATGQLLDNNKNPSPKTGQLDNR
GSQFYLAMYWAQELAAQTEDKDLQAKFKKLAEALTANEKKIVDELAAVQGKPVDIGGYYL
ADKAKYEAVMRPSPTLNAVLAPAV
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaagcaacccaccatcgtctacaccctcaccgacgaggcgccgctgctggcg
acctacgccttcctgcccatcgtgcgcgccttcaccgcgccggccggcatcaacgtgacg
acgagcgacatctcggtggccgcccgcatcctgggcgagttccccgagttcctgagcgac
gaccagaaggtgcccgacaacctggccgaactgggcaagctcacgctgcggcctgacgcc
aacatcatcaagctgcccaacatcagcgcctcggtgtcgcagctcaagtcggccatcaag
gaactgcagggcaagggctacaagattcccgactatccggagaacccgacctcggacgag
gacaaggacatccgcgcgcgctacaacaagtgcaccggcagcgccgtgaaccccgtgctg
cgcgaaggcaactccgaccgccgcgcgccccgcgccgtgaaggaatacgcccgcaagaac
ccgcacagcatggccgagtggagccaggcctcgcgctcgcacgtctcgcacatgcacggc
ggcgacttctatcacggcgaaaagtccatgaccctggaccgcgcgcgcaacgtcaagatg
gagctgatcaccaagagcggcaagaccatcgtgctcaagcccaaggtcgccctgctcgac
cgcgaaatcatcgactcgatgttcatgagcaagaaggccctgctggccttctatgaaaag
gaaatcgaagacgcgcacaagaccggcgtcatgttctcgctgcacgtcaaggcgaccatg
atgaaggtctcgcaccccatcgtgttcggccactgcgtgaagatcttctacaaggaagcc
ttcgagaaacacggcaagctgttcgacgagctgggcatcaacgtcaacaacggcatggtc
gacctgtacaacaagatcgccacgctgccccagagcacgcaggacgagatcaagcgcgac
ctgcacgcctgccacgaaggccgccccgagctggccatggtcgactcggccaagggcatc
accaacttccactcgcccaacgacgtgatcgtggacgcctcgatgcccgccatgatccgc
aacggcggcaagatgtggggcgccgacggccgcctgaaggacgtcaaggccgtgatgccc
gaatcgaccttcgcccgcatctaccaggagatcatcaacttctgcaagtggcacggcgcc
ttcgaccccaagaccatgggcaccgtgcccaacgtcggcctcatggcccagaaggccgaa
gagtacggctcgcatgacaagaccttcgagatcgccgaagacggcgtggccaacatcacc
gacctggacaccggcgaagtgctgatgagcgaagacgtcgaaaagggcgacatctggcgc
atgtgccaggtcaaggacgccgccattcgcgactgggtgaagctggccgtcaaccgcgca
cgcaactccggcatgccggtcgtgttctggctcgacgcctaccgcccgcacgaggcgcag
ctgatcaccaaggtcaagatgtacctgcacgagcacgacaccacgggcctggacatccag
atcatgagccaggtgcgtgccatgcgctacacgctggagcgcgtcgtgcgcggcctggac
accatcagcgccaccggcaacatcctgcgcgactacctgaccgacctgttccccatcatg
gaactgggtacctcggccaagatgctgtcgatcgtgcccctgatggccggcggcggcatg
tacgaaaccggcgcgggcggctcggcccccaagcacgtgcagcagctggtggaagaaaac
cacctgcgctgggattcgctcggcgaattcctcgcgctggccgtgagcctggaagacctg
ggcctgaagaccggcaacgcgcaagccaagatcctgtccaagacgctcgacgcggccacg
ggccagctgctcgacaacaacaagaacccgtcgcccaagaccggtcagctcgacaaccgc
ggcagccagttctacctggccatgtactgggcccaggaactcgccgcgcagaccgaggac
aaggacctgcaagccaagttcaagaagctcgccgaggcgctcaccgccaacgagaagaag
atcgtcgacgaactcgcggccgtgcagggcaagcccgtggacatcggcggctactacctg
gccgacaaggccaagtacgaagccgtgatgcgccccagccccacgctgaacgcggtgctg
gccccggcggtctga
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