Variovorax sp. EBFNA2: RZE79_24560
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Entry
RZE79_24560 CDS
T10564
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vae03009
]
RZE79_24560
Enzymes [BR:
vae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
RZE79_24560
Ribosome biogenesis [BR:
vae03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RZE79_24560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
MTS
Methyltransf_31
Ubie_methyltran
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Cons_hypoth95
GCD14
Methyltransf_25
Methyltransf_14
Motif
Other DBs
NCBI-ProteinID:
WPG36629
LinkDB
All DBs
Position
complement(5227421..5228692)
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AA seq
423 aa
AA seq
DB search
MHPKALLEATADLVGLVLKFDHPADQVVSRFFRDHREFGPRERATLAETVYTVLRKKLLF
DHLSPSGSGSKERRMAILGFHGPRDFLKSALNDTEKRWLDNCDAVKPDDLLERHRHNLPE
WLVAPLKAQLGDGFWPMVESLQQPAPLDLRVNAFTDKRAEVKAELAKAAIKSVVTPFSPW
GLRIEGKPALTKLDAFVRGAIEVQDEGSQLLALLLDAKRGEMVVDFCAGAGGKTLAIGAT
MRNTGRLYAFDTSAHRLDALKPRLARSKLSNVHPAAIAHERDDRVKRLAGKIDRVLVDAP
CSGLGTLRRNPDLKWRQSAKSVAELTAKQTAILQSAARLVKSGGRLVYATCSVLPEENEA
IAEAFVAANPDFEPIDAAELLQSLKVEGAETLCAGGEDGRRYLRLWPHRHATDGFFAAVW
NRK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccaaagccctgttggaggccaccgccgatctggtcggcctggtcctgaaattc
gatcacccggccgaccaggtcgtttcgcgctttttccgcgaccaccgcgagttcggcccg
cgcgagcgcgcgacgctcgccgagaccgtctacaccgtgcttcgcaagaagctgctgttc
gatcacctgtcgccctcgggcagcgggtcgaaggagcgccgcatggcgatcctgggcttt
cacggcccgcgcgacttcctgaagagcgcactcaacgacaccgagaagcgctggctcgac
aactgcgacgccgtcaaacccgacgacctgctcgaacgccatcgccacaacctgcccgaa
tggctggtcgcgccgctgaaggcacagctgggcgacggcttctggccgatggtcgaaagc
ctgcagcaacccgcaccgcttgatctgcgcgtcaatgcattcaccgacaagcgggccgaa
gtgaaggcggagcttgcgaaggctgctatcaaatcggtagtgacgccgttctcgccctgg
gggctgcgcatcgagggcaagcccgcgctgaccaagctcgacgcgttcgtccgcggcgcc
atcgaggtgcaggacgaaggctcgcaactgctggcgctgctgctggacgccaagcgcggc
gaaatggtggtcgatttctgcgccggcgccggcggcaagaccctggccatcggcgcgacc
atgcgcaacaccggccggctctacgccttcgacacctcggcccaccgcctggacgcgctc
aagccgcggctggcgcgcagcaagttgtcgaacgtgcacccggccgccatcgcccacgag
cgcgacgaccgggtcaagcgcctggccggcaagatcgaccgcgtgctggtcgacgcaccc
tgttcggggctcggcaccttgcgccgcaaccctgacctcaaatggcgtcaatcggccaag
tcggtggccgaactgacggccaagcagaccgccatcctgcaaagcgcggcgcggctggtg
aagtcgggcggccggctggtgtacgccacctgcagcgtgctgccggaggaaaacgaggcc
atcgccgaggcctttgtcgccgcgaaccccgatttcgagcccatcgacgcggcggaattg
ctccagagcctcaaggtggagggcgccgagaccctctgcgcgggtggggaagacggccgc
cgctacctgcggctgtggcctcatcgccacgccaccgacggcttttttgccgccgtgtgg
aaccggaaatag
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