Variovorax sp. EBFNA2: RZE79_24645
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Entry
RZE79_24645 CDS
T10564
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
vae Variovorax sp. EBFNA2
Pathway
vae02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RZE79_24645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vae02000
]
RZE79_24645
Transporters [BR:
vae02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RZE79_24645
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
TOBE
CysA_C_terminal
SMC_N
NACHT
AAA
AAA_22
AAA_16
nSTAND_NTPase5
MIT_C
AAA_5
Rad17
RsgA_GTPase
AAA_25
ATPase_2
AAA_14
AAA_28
ORC-CDC6-like
AAA_29
NB-ARC
TsaE
MobB
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WPG36645
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All DBs
Position
5245732..5246805
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AA seq
357 aa
AA seq
DB search
MELERIPVDISNCAKTYADGTRGLQPTNLKVEAGEVLALLGPSGCGKTTLLRLIAGLEAP
DDGSRIVFGDQDVTQRPVEHRGVGMVFQSYALFPQMTVAANIGYGLRIRGVSPAEEKRAV
GELVDLVRLGGLENKRPAELSGGQRQRVALARAVAVRPRVLLLDEPLAALDAKLKESLRD
ELAELLRRLHITAIHVTHDQQEALAIADRLAVMRAGRIVQVGRGEDLYRAPAHPFVAEFL
GRVNRLERAADAIAQGVVRLGGSYLPCPAPWQQHATLLVRPEDIEIGAPPSDDTPGWGRA
TVERRTFLGDRVQLHLRVQDQPVLVADVGRDSPFGPGDAVGLRIPAERLMTSQETSA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgaacgcatccccgtcgacatttcgaactgcgcgaagacctatgccgacggc
acgcgcggcctgcaacccacgaacctcaaggtcgaggccggcgaagtgctcgcgctgctc
ggcccctcgggctgcggcaagaccacgctgctgcgcctcatcgccgggctcgaagcgccc
gacgacggcagccgcatcgtcttcggcgaccaggacgtgacgcagcgcccggtcgagcac
cgcggcgtgggcatggtgttccagagctacgcgctctttccgcagatgacggtggcagcc
aacatcggctatggcctgcgcatccgcggcgtgtcgcctgcagaagagaagcgcgccgtc
ggcgagctggtcgacctcgtgcgcctcggtggcctggagaacaagcgccccgccgagctc
tcgggcggccagcgccagcgcgtggccctggcgcgcgccgtggccgtgcgcccgcgcgtg
ctgctgctcgacgagccgctggctgcactcgacgccaagctcaaggaatcgctgcgcgac
gagctcgccgagctgctgcgccgcctgcacatcacggccatccacgtcacgcacgaccag
caggaagcgctggccatcgccgaccgcctcgccgtgatgcgcgccgggcgcatcgtgcag
gtcggccgcggcgaagacctgtaccgcgcgcccgcgcatcccttcgtggccgagttcctg
ggccgggtcaaccggctggagcgcgcggccgacgccatcgcgcagggcgttgtccgactc
ggagggtcgtacctgccctgccccgcgccctggcaacagcatgcgacgctgctggtgcga
cccgaagacatcgagatcggcgctcccccgtccgacgacacgcccggctggggccgcgcc
acggtcgaacgccgcaccttcctcggcgaccgcgtgcagttgcacctgcgcgtgcaggac
cagcccgtgctggtggccgacgtgggccgcgacagccccttcgggccgggcgacgcggtg
ggcctgcgcatccccgccgaacgcctgatgacgtcgcaggaaaccagcgcatga
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