Variovorax sp. EBFNA2: RZE79_25230
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Entry
RZE79_25230 CDS
T10564
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vae03032
]
RZE79_25230
03036 Chromosome and associated proteins [BR:
vae03036
]
RZE79_25230
03400 DNA repair and recombination proteins [BR:
vae03400
]
RZE79_25230
DNA replication proteins [BR:
vae03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RZE79_25230
Chromosome and associated proteins [BR:
vae03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RZE79_25230
DNA repair and recombination proteins [BR:
vae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RZE79_25230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WPG36757
LinkDB
All DBs
Position
5366570..5366995
Genome browser
AA seq
141 aa
AA seq
DB search
MNRIELVEKIATTHNLSKAEAARVLETITSSVVAAVKKGDSVQLVGFGTFKQVARAARSG
FNPQAGTKIKIAATKVPKFVAGAAFKAAIDPKAAKRKAEKAAAAPAAKKAAAPKKAAVTK
AAVTKAVVAKAPAKKAVAKKK
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcatcgaactggtcgagaagatcgccaccacccacaacctgagcaaggccgag
gccgcacgcgtgctcgaaacgatcaccagcagcgtcgtcgctgccgtgaagaagggcgac
tcggtccagctggtcggcttcggtactttcaagcaagtcgcacgcgctgcacgctcgggc
ttcaacccccaagccggcaccaagatcaagatcgccgccaccaaggtgccgaagttcgtc
gccggcgctgccttcaaggccgccatcgatcccaaggctgccaagcgcaaggctgaaaag
gccgctgctgcacccgctgccaagaaggccgccgctcccaagaaggctgctgttacgaag
gcagctgtcaccaaggcagtcgtcgccaaggctcccgccaagaaggctgtcgccaagaag
aagtaa
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