Variovorax sp. EBFNA2: RZE79_26125
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Entry
RZE79_26125 CDS
T10564
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00362
Benzoate degradation
vae00624
Polycyclic aromatic hydrocarbon degradation
vae01100
Metabolic pathways
vae01120
Microbial metabolism in diverse environments
vae01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RZE79_26125 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
RZE79_26125 (pcaH)
Enzymes [BR:
vae01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
RZE79_26125 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
WPG36925
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Position
5551990..5552712
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AA seq
240 aa
AA seq
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MTKTQGAQPTLTPRDWDAHPSYIYPGYKSTGKRGPQKPLIPLKASLGELQQPVYGHDSIG
EFDHDLTRNARVNGEPLGERMILRGQVLDERRRPVANTLVELWQANASGRYVHKVDQHDA
PLDPNFLGAGRCLTDSEGRYRFLTIKPGAYPWGNHPNAWRPQHIHLSLFGQSFASRLVTQ
MYFPGDPLLQYDPMVTGTPERYRNRLIADFSLDITEEGYALGYQFDMVLRGADETPFENR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagacccaaggtgcccagcccacactcaccccgcgcgactgggacgcccacccc
agctacatctaccccggctacaagtcgaccggcaagcgcggcccgcagaagccgctgatt
ccgctgaaggcctcgctcggcgagctgcagcagcccgtgtacggccacgacagcatcggc
gagttcgaccacgacctcacgcgcaacgcgcgcgtcaacggcgagccgctgggcgaacgc
atgatcctcaggggccaggtgctcgacgagcgccgccgcccggtcgccaacacgctggtc
gagctctggcaggcgaacgcctcgggccgctacgtgcacaaggtcgaccagcacgacgcc
ccgctcgaccccaacttcctgggcgcgggccgctgcctgaccgacagcgaaggccgctac
cgcttcctcaccatcaagcccggcgcctacccctggggcaaccacccgaacgcctggcgc
ccgcagcacatccacctgtcgctgttcggccagagcttcgccagccgcctcgtgacgcag
atgtacttccccggcgacccgctgctgcagtacgaccccatggtcaccggcacgcccgag
cgctaccgcaaccgcctcattgccgacttcagcctcgacatcaccgaggaaggctacgcc
ctcggctaccagttcgacatggtgctgcgcggcgccgatgaaacgccgttcgagaaccgc
tga
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