Variovorax sp. EBFNA2: RZE79_26160
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Entry
RZE79_26160 CDS
T10564
Name
(GenBank) BamA/TamA family outer membrane protein
KO
K07278
translocation and assembly module TamA
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vae02000
]
RZE79_26160
Transporters [BR:
vae02000
]
Other transporters
Pores ion channels [TC:
1
]
RZE79_26160
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Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_TamA_1
BDV_P10
Motif
Other DBs
NCBI-ProteinID:
WPG36932
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Position
5557293..5559227
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AA seq
644 aa
AA seq
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MVRVASVLSPALWPALLFSGVLLLQGCSLLPKKEAADTGASTVGVVRSGDSKGDTAKDDD
GKAKADGRRRAFTVDVRGPETERDYLTRHLEIQRYRELDDLGVTEVSRLMVAAEANAREL
LGTLGYFTPTLTLELKETPDSTEAPREVVITVAPGERTKVSTVQIRYSGQIADDPTAEAQ
RDAIRTGWALRAGEPFTQGAWDDAKTTALRSLTARRFPTGSVEVSRAEIDADRHEARLGV
TYQSGPAYKFGPLVLRGVERYDADAARRIARLPTGTDYDQQKLLDAQQRLASSGYYDSVF
LTLDTDNNTPLAAPVIAQLREAPLQKVVMGVGFTTDNGPRLSIDHTHNRMPLLGWRAVSR
LSLDNDIQSLGTEWNAVPNDRGWRWFAGGELKSEQSGSYVVDSGRLRGGRNKSSDHIDRS
YFLQYDYAHNRGIDAPPSASAVTANWGWTGGYFDDNASPSRGYGLALEMAAGYTLTGQQL
PFTRTYARFLGVLPLGAADDKNARARRSRLQMRLEAGAVAAKDIAQIPSTLMFLTGGDTT
VRGYSYKQIGTVRADGQTVAGRYLGVASLEWQRPFVYKDKLTEWESVVFVDAGAVADKPG
ELKPKVGVGVGARWRSPVGPVQADLAYGVDSKKFRLHFRLGFTF
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggtcagggtggcatccgttctttcgccggcgttgtggccggctttgcttttttccggc
gtcctgctcttgcaaggctgcagcctgctgcctaaaaaagaggcggcggacacgggcgcg
tccacggtcggcgtggtgcgcagtggcgacagcaaaggcgacaccgccaaggacgacgac
ggcaaggccaaggccgacggccggcgccgcgccttcaccgtcgacgtgcgtggccccgag
accgagcgcgactacctcacgcgccacctcgaaatccagcgctaccgcgagctcgacgac
ctgggcgtgaccgaggtctcgcgcctcatggtcgcggccgaggccaacgcgcgcgaactg
ctgggcacgctcggctacttcacgcccacgctcacgctcgaactcaaggaaacgcccgac
agcaccgaggccccgcgcgaggtcgtcatcaccgtcgcgcccggcgagcggaccaaagtg
tcgaccgtgcagatccgctacagcggccagatcgccgacgaccccaccgccgaagcgcag
cgcgacgccatccgcaccggctgggcgctgcgcgccggcgagcccttcacccaaggggcg
tgggacgacgccaagaccaccgcgctgcgcagcctcacggccaggcgctttcccaccggc
agcgtggaagtcagccgcgccgagatcgatgccgaccgccacgaggcccgcctcggcgta
acttatcaatcgggcccggcctacaagttcggcccgctcgtgctgcgcggcgtggagcgc
tacgacgccgacgccgcgcgccgcatcgcgcgcctgcccaccggcaccgactacgaccag
cagaagctgctcgacgcgcagcagcgcctggccagcagcggctactacgactcggtgttc
ctcacgctcgacaccgacaacaacacgccgctggccgcgcccgtgatcgcccagctgcgt
gaagcgccgctgcagaaggtggtgatgggcgtcggcttcaccaccgacaacggcccgcgc
ctgtcgatcgaccacacccacaaccgcatgccgctgctcggctggcgcgcggtgtcgcgg
ctctcgctggacaacgacatccagtcgctgggcaccgagtggaacgccgtgcccaacgac
cgcggctggcgctggtttgccggcggcgaactcaagagcgagcagtcgggcagctacgtg
gtcgacagcggccggctgcgcggcgggcgcaacaagtcgagcgaccacatcgaccgcagc
tacttcctgcagtacgactacgcccacaaccgcggcatcgacgcgccgccctcggcctcg
gccgtcaccgccaactggggctggaccggtggctacttcgacgacaacgcgtcgccctcg
cgcggctacggcctggcgctcgaaatggccgcgggctacacgctcacgggccaacagctg
cccttcacccgcacctacgcgcgctttctcggcgtgctgccgctgggcgcggccgacgac
aagaacgcccgcgcacgccgcagccggctgcagatgcgcctggaggccggcgccgtcgcc
gccaaggacatcgcgcagatcccgtccacgctgatgttcctcaccggcggcgacaccacc
gtgcgcggctacagctacaagcagatcggcaccgtgcgcgccgacggccagaccgtggcg
ggccgctacctcggcgtggccagcctcgaatggcagcgccccttcgtctacaaggacaag
ctcaccgaatgggagagcgtggtgttcgtcgatgccggcgccgtggccgacaagcccggc
gagctcaagcccaaggtcggcgtgggcgtcggcgcgcgctggcgcagccccgtcggcccc
gtgcaggccgacctggcctacggcgtcgactcgaagaaattccgcctgcacttccgtctc
ggcttcaccttctga
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