Variovorax sp. EBFNA2: RZE79_26300
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Entry
RZE79_26300 CDS
T10564
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vae03400
]
RZE79_26300
Enzymes [BR:
vae01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RZE79_26300
DNA repair and recombination proteins [BR:
vae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RZE79_26300
Prokaryotic type
RZE79_26300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WPG36959
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Position
5589730..5591232
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AA seq
500 aa
AA seq
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MPPILLAVDKTYPKGLMWFRRDLRVDDNAALYRALRACRQVVCVFVFDRSILDALPRADR
RVEFIRESLVELEAELRGLGSGLIVRHAVAAEEIPALAHTLDVQAVFANRDDEPDALARD
ARVLGALANTGISFHTFKDSTVFDRDEVMTKAGLPYTVFTPYKRAWLAKVDSFFLKSYPV
RSHADALAPPPPALNGPVPTLGEIGFESTNLQTLEIPTGTRGAGALFEDFFERIDRYDEA
RNFPAVRGPSYMGVHLRFGTVSIRQLASVAHQLALQGNTGAATWLSELVWRDFYFQILAH
FPHVHANGESKSFRPEYDKIAWHHGKHADQLFDAWCEGRTGYPLVDAAMLQIRQSGYMHN
RLRMVVASFLCKDLGLDWRRGERYFALHLNDFELASNNGGWQWASSTGCDAQPYFRIFNP
VTQSERFDPEGKFIRRYLPQLAGLSNVAIHAPWMASPVELEAAGVKLGDNYPTPVVDHAE
AREKTMQRYATARSKALQKP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgattttactggccgtcgataagacctatcccaaagggctcatgtggttccgc
cgggacctccgggtggacgacaacgcggcgctgtaccgggcgctgcgggcctgccggcag
gtggtgtgcgttttcgtgttcgaccggtccattctggacgccctgccccgcgcggaccgg
cgggtcgaattcatccgcgaatcgctggtggaactcgaagccgagctgcgcggcctgggc
agcgggctcatcgtgcggcacgcggtggccgccgaagagattccggcgctggcccacacg
ctcgacgtgcaggcggtgttcgccaaccgcgacgacgagcccgacgccctggcgcgcgac
gcccgcgtgctcggcgcgctggccaatacaggcatcagcttccacaccttcaaggacagc
accgtcttcgaccgcgacgaggtcatgaccaaggccggcctgccctacaccgtgttcacg
ccgtacaagcgagcctggctggcgaaggtggattcgttcttcctgaagtcgtacccggtg
cgcagccacgccgacgcgctcgcaccgccgcccccggccctgaatgggccggtgcccacg
ctgggcgagatcggttttgaaagcaccaacctccagacgctggagattcccaccggcacg
cgcggtgcgggcgcgctgttcgaagatttcttcgagcgcatcgaccgctacgacgaggcg
cgcaacttcccggcggtgcgcggcccgagctacatgggcgtgcatctgcgcttcggcacg
gtgtcgatacggcagctcgccagcgtggcgcaccaactggcgctgcagggcaacaccggt
gccgcgacctggctcagcgaactggtctggcgcgacttctactttcagatcctggcgcac
tttccgcatgtgcatgcgaacggcgagtcgaagagctttcgccccgagtacgacaagatc
gcctggcaccacggcaagcacgccgaccagctgttcgacgcctggtgcgagggccgcacc
ggctatccgctggtcgatgcggcgatgctgcagatccggcagagcggctacatgcacaac
cggctgcgcatggtggtggcgagtttcctgtgcaaggacctggggctggactggcggcgc
ggcgagcgttactttgcgctgcacctcaacgacttcgagctggcctcgaacaacggcggc
tggcaatgggccagctcgaccggctgcgatgcccagccctacttccgcatcttcaacccg
gtgacgcagagcgaacgcttcgaccccgaaggcaagttcatccgccgctacctgccgcag
ctcgcggggctgtcgaacgtggcgatccacgcgccgtggatggcgtcgccggtcgagctg
gaggcggcgggcgtgaagctgggcgacaactacccgacgccggtggtagaccacgccgag
gcgcgggagaagacgatgcagcgctatgcgacggcgcggagcaaggccctgcaaaagccg
tag
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