Variovorax sp. EBFNA2: RZE79_28775
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Entry
RZE79_28775 CDS
T10564
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vae Variovorax sp. EBFNA2
Pathway
vae02020
Two-component system
vae02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RZE79_28775
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RZE79_28775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vae03000
]
RZE79_28775
Transcription factors [BR:
vae03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RZE79_28775
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
HTH_24
MarR_2
GntR
TrmB
AlkZ-like
Crp
HHH_XRCC3_RpoA
MarR
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
WPG37432
LinkDB
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Position
complement(6111358..6112122)
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AA seq
254 aa
AA seq
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MPPGNLNPQNVLGGSIKDRVRPANATELDGIPWLHTLTPTERRRAEATLVVGEAEPGDLV
CRVGRSPTYWFGVVEGLLKMSNDNADGGSVTYTGVPPGGWFGEGTVMKREPYRYNIQALR
RSLVAGLPIESFHWLLDHSIGFNRFVMNQLNERLGQFIAALEIDRLNNPDARVARNLVSL
FNPVLYPGVGEVLRITQQELAYLVGLSRQRVNEALNALSAQGLIRVEYGGLRVLDLPGLR
ATAMSSRKNNSTSN
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctggcaacctcaatccgcagaacgtgctcggcggttccatcaaggaccgcgtg
cgccccgcgaatgcgaccgaactcgatggcattccgtggctgcacacgctcacgcccacc
gagcgccgccgcgccgaggccacgctcgtggtcggcgaggccgagcccggcgacctggtg
tgccgcgtcgggcgctcgcccacctactggttcggcgtggtcgagggcctcttgaagatg
agcaacgacaacgccgacggcggctcggtcacctacaccggcgtgccgcccggcggctgg
ttcggcgaaggcacggtgatgaagcgcgagccctaccgctacaacatccaggcgctgcgc
cgcagcctcgtggcggggcttccgatcgagagcttccactggctgctcgaccattccatc
ggcttcaaccgcttcgtgatgaaccagctcaacgagcggctcggccagttcatcgcggcg
ctggagatcgaccgcctcaacaaccccgacgcgcgcgtggcgcgcaacctggtgtcgctg
ttcaacccggtgctgtaccccggcgtgggcgaggtcttgcgcatcacgcagcaggagctg
gcgtatcttgtcggcctgtcgcgccagcgcgtgaacgaggcgctcaatgcgctgtcggcg
cagggcctgatccgcgtcgagtacggcggcctgcgcgtgctcgacctgccgggcctgcgc
gccaccgcgatgtccagccgcaagaacaacagcacctcgaactga
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