Variovorax sp. EBFNA2: RZE79_28895
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Entry
RZE79_28895 CDS
T10564
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
vae Variovorax sp. EBFNA2
Pathway
vae02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RZE79_28895 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vae02000
]
RZE79_28895 (xylF)
Transporters [BR:
vae02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
RZE79_28895 (xylF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Rotamase_2
Motif
Other DBs
NCBI-ProteinID:
WPG37455
LinkDB
All DBs
Position
complement(6141716..6142744)
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AA seq
342 aa
AA seq
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MQLTTKHTLAAMAFGLTAVGAMAQTVVGVSWSNFQEERWKTDEAAIKAQLEKLGAKYISA
DAGGSPEKQLGDIEGLMSKGAKALIVLAMDKDAILPAVTKATRQKVPVVAYDRLIEAPGV
FYITFDNVEVGRMEAREVLKVKPKGNYVIIKGSPSDPNADFLRAGQQEVLEPSIKKGDIK
IVGDEYTEGWKPEVAQKNMEQILTKNGNKVDAVVAANDGTAGGAVAALTAKGLRGIPVSG
QDADFAALNRIALGTQTATIFKDSRELGREAASAAIALSQGKPVEKAAQWNSGPKKVALS
SRLLTPVPITRDNLDVVVKAGWIKKDELCKGVPGANAPAACK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgacaacgaaacacaccctggccgccatggcgttcggtctcacggccgtgggc
gcgatggcgcagaccgtggtcggcgtgagctggtccaacttccaggaagagcgctggaag
accgacgaggccgcgatcaaggcgcagctcgaaaagctcggcgcgaagtacatcagcgcc
gacgcgggcggttcgcccgagaagcagctgggcgacatcgaagggctgatgtcgaagggc
gcgaaggcgctcatcgtgctggcgatggacaaggacgcgatcctgcccgccgtgaccaag
gccacgcggcagaaggtgccggtggtggcgtacgaccggctgatcgaggcgcccggcgtg
ttctacatcaccttcgacaacgtcgaggtcgggcgcatggaggcgcgcgaggtgctcaag
gtcaagcccaagggcaactacgtgatcatcaagggctcgccgagcgacccgaacgccgac
ttcctgcgcgcgggccagcaggaggtgctcgagccttcgatcaagaagggcgacatcaag
atcgtcggcgacgagtacaccgaaggctggaagcccgaggtcgcgcagaagaacatggag
cagatcctcaccaagaacggcaacaaggtcgacgcggtggtggcggccaacgacggcacg
gccggcggcgcggtcgcggcgctcacggccaagggcctgcgcggcattccggtgtcgggc
caggacgccgactttgcggcgctcaaccgcatcgcgctcggcacgcagacggccaccatc
ttcaaggactcgcgcgagctcggccgcgaagctgcctccgccgccatcgcactgtcgcag
ggcaagccggtcgagaaggccgcgcagtggaactcgggcccgaagaaggtcgcgctttcc
tcgcgcctgctcacgccggtgcccatcacgcgcgacaacctcgacgtcgtcgtgaaagcc
ggctggatcaagaaggacgagctctgcaagggcgtcccgggtgcgaacgcaccggcggcc
tgcaagtaa
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