KEGG   Variovorax sp. EBFNA2: RZE79_29125
Entry
RZE79_29125       CDS       T10564                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
vae  Variovorax sp. EBFNA2
Pathway
vae03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vae00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RZE79_29125
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vae02044]
    RZE79_29125
Secretion system [BR:vae02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RZE79_29125
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V Sarcoglycan_1 DUF6484
Other DBs
NCBI-ProteinID: WPG37498
LinkDB
Position
complement(6180903..6183803)
AA seq 966 aa
MPTYGAAPWKLEGLNVARLSEQARLIKLQLPASAPQNAVVVERFTGSEGLNELFEFTIDT
LATSSEFDPFALIGEELSLRLLLANGSFRTWHGYLTAVDALGGDGGLARYRLHLQPWLAA
LGLRRDSFVYAAKHVQDIVSEVFADHTTASFSFEVTQEMPVRPTCVQYRESDLAFVLRLL
AEEGLSFRFAHEQQSANGSSTGNNTTPSHHRLVIFDRAATPPDCALPQIRFHRVDATEST
DAITAWSSRRQVATNAVMRNAWDASVLQAPTGAVQSALAMGDVPVLEHYDGAGAQRYADS
ATAARRAEQQLVAFESRIKRYGGAGSVRQLGAGERFTLTQHDRYEGRKFLALRVRHEAAN
NLGAQAAQVLEAGELEKGSYRNSFEAQPADAQVVPLWRPKPTAPEAMVALVVGADDDEAP
TAVHTQRDHRVQVRFHWQTQRAGQQQSTSSGQGSLVAAGRHASNRQSVWLRVAAPVAGPN
WGAHHLPRVGSEVLVSFIEGDIDRPVVAQQLYNGQDLPPWSAGTDSSANHAGVLSGWHSR
ALDGSGYNQWIADDAPGQVRTRLASSHAASQLNLGHLNAQSPDESSRGAWRGSGAELRSD
AWVATRAGEGLLISTLAQDRAAGSVQDTTSVRDQLAGALREAQKLSDAAGGAKALALSAT
ALLQPLIDDIDPQKNGHYPGSVNGQDAREPKGGEGAGSREGQDPVPAFARPLMVLDAAMS
LNMATPASATVYAGEAIHWTAQAQAHIAAGKTVSFAAAKSVGLYSHKGGIQVIAQDGPMS
VQAHTDELEWLAKEGFTVTSSNDEIHVLAQKKITLKGGQTSIELDGMNITLKMPGLLDIK
GTSKSFVGPKGNPVELPALPAGDLPPGTVQLDHRYHDDEGLAGAKYFLRLPGGAERTGVL
DDQGRATVTDVPLGGTVSFGPAAGAFQRKDKTPTPAHDPNPSEEKLGGLVDKYFKQPSSS
GQEGRE
NT seq 2901 nt   +upstreamnt  +downstreamnt
atgccgacctatggcgcggcgccatggaagctcgaaggcctgaacgtcgcgcggctttcg
gagcaggcgcggctcatcaagctgcagctgcccgcgtcggcgccgcagaacgccgtcgtc
gtcgagcgcttcaccggcagcgaaggcctcaacgaactcttcgagttcaccatcgacacc
cttgccacgtcgagcgagttcgatccgttcgcgctgatcggcgaagagctgagcctgcgc
ctgctgctggccaatggcagctttcgcacctggcacggctacctcacggccgtcgatgcg
ctgggcggtgatggcggccttgcgcgctatcggctgcacctgcaaccctggcttgctgcg
ctcggcctgcgccgcgacagcttcgtgtacgccgccaagcacgtgcaggacatcgtcagc
gaagtgttcgccgaccacaccaccgcgagcttcagcttcgaagtcacacaggagatgccc
gtgcggcccacctgcgtgcagtaccgcgagtcggatttggcctttgtgctgcgcctgctc
gcggaagaaggcctgagctttcgcttcgcgcatgaacagcagtctgccaatggcagcagc
acggggaacaacaccacgccctcacaccaccgcctggtgatcttcgaccgcgcggcgacc
ccgcccgactgcgccttgccgcagatccgctttcaccgcgtcgacgccaccgaatcgacc
gatgccatcaccgcatggagcagccgacgtcaggttgccaccaacgccgtcatgcgcaac
gcctgggacgccagcgtgctgcaagcccccaccggcgccgtgcagagcgcgctggcgatg
ggcgatgtgcccgtgctggagcactacgacggcgccggtgcgcagcgctacgccgacagc
gccactgccgcccgccgcgccgagcagcagctcgtggccttcgagtcgcgcatcaagcgc
tacggcggcgcgggcagcgtgcgacagctcggcgcgggcgagcgcttcacgctcacgcag
cacgaccgctacgagggccgcaaattcctcgcgctgcgcgttcgccacgaagcagccaac
aacctcggcgcacaagccgcacaggtgctcgaagccggcgagctcgagaagggcagctac
cgcaacagcttcgaggcccagccggcggatgcacaggtcgtgccgctgtggcgacccaag
cccacagctcccgaagccatggtcgcgctcgtggtcggggccgatgacgacgaggcaccg
accgccgtccacacacagcgtgaccatcgcgtgcaagtccgtttccattggcagacccag
cgtgcgggccagcagcagtcgacgagcagcggacaaggcagcctggtcgccgccggccgc
catgccagcaaccgccagtccgtctggctgcgcgtggcggcaccggtggcgggccccaac
tggggcgcccaccacctgccgcgcgtgggctccgaggtgctcgtgtccttcatcgaaggc
gacatcgaccgaccggtggtcgcccagcagctgtacaacggacaggatctgccgccctgg
tcggccggcaccgattcgtcggccaatcatgccggcgtactctcaggctggcacagccgc
gcgctcgacggcagtggctacaaccagtggatcgccgacgacgcgcccggccaggtgcgc
acccgcctggccagctcgcacgcggccagtcaactgaacctgggccacctcaatgcccag
tcgcccgacgagagcagccgtggcgcctggcgcggcagcggcgcagagctgcgctccgac
gcctgggtcgccacgcgcgctggcgagggtttgctgatctccacgctggcccaggaccga
gcggcgggcagcgtgcaggacaccaccagcgtgcgcgatcaactcgcgggtgcgctgcgc
gaggcgcagaaactgtccgatgcggctggcggcgcgaaggcgttggcattgagtgccacg
gcgctgctgcagccgctcatcgacgacattgatccgcagaagaacgggcactacccgggc
agcgtcaacgggcaggacgcgcgcgagccgaagggtggagaaggcgcaggttcgcgcgaa
ggtcaagaccctgtgcccgcttttgcgcggccgctcatggtgctcgacgcggccatgagc
ctgaacatggccacgcccgccagcgcgactgtgtacgcgggcgaggcgatccattggact
gcgcaggcgcaggcccacatcgcagcgggcaagaccgtgagctttgcggccgccaaatcc
gtggggctgtacagccacaagggcggcatccaggtcatcgcgcaagacgggccgatgagc
gtgcaggcgcacaccgacgaactcgaatggctggccaaggaaggcttcacggtcaccagc
agcaatgacgagattcacgtgctggcgcagaagaagatcacgctcaagggggggcagaca
agcatcgagctggatgggatgaacatcaccttgaagatgccggggctgctggacatcaag
gggaccagcaagagctttgtggggccgaaggggaatccggtcgaactgccagcgttgcct
gccggcgatcttccgccaggcacagtccaactggatcatcgatatcacgacgatgaagga
ctcgccggggccaagtacttcctccggcttcccggcggcgcagagcgcacaggtgttctc
gacgatcaggggcgagcaaccgtcaccgacgtgccattgggcggcaccgtgagcttcggg
ccggctgcaggggcgtttcagcgcaaggacaagacgccgacccctgcgcacgaccccaat
ccgagtgaagaaaaactcggtggccttgtcgacaagtatttcaagcaaccgtcatcttcc
gggcaagaaggcagggaatag

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