Variovorax sp. EBFNA2: RZE79_29215
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Entry
RZE79_29215 CDS
T10564
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vae02000
]
RZE79_29215
Transporters [BR:
vae02000
]
Other transporters
Pores ion channels [TC:
1
]
RZE79_29215
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
BON_like
DUF561
Motif
Other DBs
NCBI-ProteinID:
WPG37515
LinkDB
All DBs
Position
complement(6206666..6207508)
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AA seq
280 aa
AA seq
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MNCSLRVLVLSMACGLALVPAVQAQQPQQQPAAGATAARVETTAAAVGKGEPVVAGGQVP
DEATRAAVIEALRRIYGPSGVIDKIEVVSTVSMPANWAANVQRLITPSLKDIHRGQFQIE
GTQMALSGEVGNEALRQKIVSDMANALNPTYTIKNSLRVPVSEQIAVDQVLGNRTIEFEL
GSATLTSKGRAILDEMAPILQKLTNKSVAVVGHTDNAGNRTSNLALSQSRAESVKGYLVG
KGIDPMTLTTSGVGPDQPVASNATDEGRSRNRRIEFRVGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaattgttctttgcgcgttctcgtgctgtccatggcctgcgggctcgcgctcgtgccg
gccgtgcaggcccagcaaccccaacaacaacccgcggcgggcgccaccgccgcccgcgtc
gagaccacggccgcggccgtcggcaagggcgaaccggtcgtggccggcgggcaggtgccc
gacgaagccacgcgcgccgccgtcatcgaggcgctgcgccgcatctacggccccagcggc
gtgatcgacaagatcgaggtggtgagcaccgtcagcatgccggccaactgggccgccaac
gtgcagcggctgatcacgccctcgctcaaggacatccatcgcggccagttccagatcgag
ggcacgcagatggcgctgagcggcgaggtcggcaacgaggcgctgcgccagaagatcgtg
agcgacatggcgaacgcgctcaacccgacctacaccatcaagaacagcctgcgcgtgccc
gtgtcggagcagatcgccgtcgaccaggtgctgggcaaccgcaccatcgagttcgagctg
ggcagcgccacgctcaccagcaaaggccgcgccatcctcgacgagatggcgcccatcctg
cagaagctcacgaacaagtcggtggcggtggtgggccacaccgacaacgccggcaaccgc
acgtcgaacctggcgctgagccagtcgcgcgccgaatcggtcaagggctacctggtaggc
aagggcatcgacccgatgacgcttacgacctcgggcgtgggccccgaccagccggtggcg
agcaacgcgaccgacgaggggcgctcgcgcaaccggcgcatcgagttccgggtcggacgt
taa
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