Variovorax sp. EBFNA2: RZE79_29910
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Entry
RZE79_29910 CDS
T10564
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae00020
Citrate cycle (TCA cycle)
vae00640
Propanoate metabolism
vae00660
C5-Branched dibasic acid metabolism
vae00720
Other carbon fixation pathways
vae01100
Metabolic pathways
vae01110
Biosynthesis of secondary metabolites
vae01120
Microbial metabolism in diverse environments
vae01200
Carbon metabolism
Module
vae_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vae_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RZE79_29910 (sucD)
00640 Propanoate metabolism
RZE79_29910 (sucD)
00660 C5-Branched dibasic acid metabolism
RZE79_29910 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
RZE79_29910 (sucD)
Enzymes [BR:
vae01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
RZE79_29910 (sucD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
WPG37647
LinkDB
All DBs
Position
complement(6361293..6362186)
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AA seq
297 aa
AA seq
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MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNAFVAGVNPKKAGESIFNIPIFGSV
KEAATQTGATVSVIYVPPAGAAAAIWEAVEADLDMAICITEGIPVRDMLEVRNRMKAKEA
AGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTEIGLG
QSSAVGIGGDPINGLKHIDVMQAFNDDPDTDAVIMIGEIGGPDEADAARWCKDNMKKPVV
GFIAGVTAPPGKRMGHAGALISGGADTAEAKLAIMEECGFTVTRNFSELAKLLKGKL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatctacatcaacaaagacaccaaagtcatcacgcaaggcatcaccggcaagacc
ggtcagttccacaccgaaaagtgccaggaatacgcgaacggcaagaacgccttcgtggcc
ggcgtgaacccgaagaaggccggcgagtcgatcttcaacatcccgatcttcggttcggtg
aaggaagccgccacgcaaaccggcgctaccgtgtcggtgatctacgtgccgccggcaggc
gccgcggccgccatctgggaagccgttgaggccgacctggacatggcgatctgcatcacc
gaaggcattccggttcgcgacatgctcgaagtgcgcaaccgcatgaaggccaaggaagcg
gccggcggcaagaagaccttgctgctgggcccgaactgccccggcctgatcacgcccgac
gaaatcaagatcggcatcatgcccgggcacatccaccgcaagggccgcatcggcgtggtc
tcgcgctcgggcacgctgacgtacgaagccgtggctcaactgacggaaatcggcctgggc
caatcgtcggcagtcggcatcggcggcgacccgatcaacggtctgaagcacatcgacgtg
atgcaagccttcaacgacgatccggacaccgacgccgtcatcatgatcggtgaaatcggc
ggcccggacgaagctgacgcagcccgctggtgcaaggacaacatgaagaagccggtcgtc
ggtttcatcgccggtgtcactgcccctcccggcaagcgcatgggccacgccggcgcgctg
atctcgggcggtgccgacacggccgaagccaagctcgccatcatggaagagtgcggcttc
accgtaacgcgcaacttctcggaactggcaaagctgctcaagggcaagctctaa
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