Variovorax sp. EBFNA2: RZE79_31555
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Entry
RZE79_31555 CDS
T10564
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
vae Variovorax sp. EBFNA2
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Ortholog
Paralog
GFIT
Motif
Pfam:
PATR
AC_1
ESPR
Motif
Other DBs
NCBI-ProteinID:
WPG41451
LinkDB
All DBs
Position
unnamed:256084..264504
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AA seq
2806 aa
AA seq
DB search
MNTAYKTLWNAALGAWVAVCETAPARGKRSGGRRASSRASLVAPLVAVPAFLLSGTAWAA
CTLTGTTLDCAGVTPGWVGVADGGTINNTGTIATLGDGTWAINVGSNVTVNNTGTIHGTA
GVVTGGNSVINNNGGTISSTDRAVQVTGGPVTLTNSNGGVIEGSAGALLYGGGTIVNTGN
SRITSNGNYLGLGFGGGSANITNTAGSTIEGIYSIYGQATAITLDNGGLLRGHVALDGGL
VQWVTLRTGSRVQGNLTIGNRAGSTLTLAGAGTQIHSQAVTGVTDFGGDLIKNDSGDWIV
DRAIGPRTATVNGGALGFASGGSFGTGTALSLAAAGTMLHTDSGTAVVGNLTGVAGSMVA
LAAGSSLRMADDSSTTVASDFSGGGTLIKSGIGVLTLSGNNSAFTGSFTANAGTLQAASA
QAIGGAALGIGGAVTLSSPFALALNNVDLISGSGVLDVQTPGAVSFGGVVSGAGSLDLRG
IGGTVSLLNNNSYAGGTRLAGSTVVLGSNTALGTGTAAIEGNTALSGNAALTLGNAFAIG
KSNTLSISGPALTLDGQISGDGAIVKQGVDVLTLRGDNSYSGGTTVAMGTLSVSNKSGSA
TGTGAVQVQSGAALVGSGAIAGPVNVAAGARLSVGNGGVGALATGALTLAAGSTLEMEMG
KAGKAGGAFNDLLNVNGDLSLAGTLDLAQSAGGTFGAGIYRLINYTGALTANAMTIGSAP
TPLGYLALQTGVANQINLVNTGGLALNMWDGNKVANFNNGQVEGGSGTWRAGSPGDNWTD
ANGIVNAGWIQDGLAVFTGKAGTVAVDNTGAGGAVRIGGAQFAVDGYVVNGDPLAINAAN
TTVRVGDGTAAGAGMTATINAAIGGTGGLVKDDGGTLVLTGNNSYMGGTSVKGGILQISG
DANLGAIGTGLALDGGTLRIATGSTPFFSMRNVALGAGGGTIDLGNSFLELRGVVSGSGL
FTVTGKGGSLSLVAANSYSGGTVLKDGASIVASAGGVFGGGAVQQQGDGTVLAFTNAASA
GGNDYIVGRAATADNGNVLSFAQTTTAATSKITVNGGGWQAPGVNILRFGGSSSAGASTI
VNAGGGIGFLETASAGTATITNGSNSLLVFGQKATAGSAQIANTAGGLVLFADTATGTNA
SVTNAAGATLDVSGATGGKPAVELGSLTGAGAVVLGATQLALGGLGNSDTISGTVSDKGS
IFAQPGSGTGGSIVKVGAGTLTLSGANSYTGGTTVAAGTLAVNNVGGSATGTGAVQVQSG
ATLAGIGSIAGAVSVGKGGQLSAGNGGAGTLTLGSLSLADGAVLNYDLGQAGVAGGSLND
LVNVNGNLQLDGTLNVAESTGGKFGAGLYRLINYTGTLTDNGLDIGTAPTDASKMSVQTS
VANQINLVNSNGLVLNLWDGVNSGNFNDGKIAGGSGTWRAGVPGDSWTDANGTANGTWVQ
GGFAIFAGKAGTVTVDNTGAGGAVRIGGAQFAVDGYTIDGAALTMNAPVSIIRVGDGTAA
GASMTATINAAITGAGGLVKDDVGTLVLGGSNSYTGGTTVKGGTLQIASDANLGAAAGGL
ALQGGATLHVTGDSVSARAVSLGAGSNTFDIDAVRTVALNGTASGAGSLRKTGAGTLRLG
AANSHAGGTFVDAGTLATEVTGALGSGAATVATGATLQLGGGFDAGTTAIGNQGKVRFQD
KSSAGTSTITNAAGGVLAFAGDASADKATVINQAGAQVRIDQATTGVSFGALSGAGDVVL
GAKALTLGGSGGDNSLSGTVSGTGGSVVKIGAGTLVLTGANTYTGATTVAAGTLRVNNTS
GSGTGTGSVQVQSGATLAGSGSIAGAVTIAKGGILAAGNSPGTLTLGALTLAGGSTLNYE
LGQAGVPGGALNDLINVTGNLQLDGTLNIAQSAGGTFGPGLYRLMSYGGTLTDFGLDIGT
APAGAKLADLQVQTSVANQVNLVNRAGLSLNFWDGGDSSKYNDGQVAGGNGTWRLGSPQP
SQDGWTDMDGKLNANWAQNQFAVFGGKAGTVTVDGGGGAVRIAGVQFAVDGYTVQGDGIT
LDNANSVIRVGDGTAAGANMTATMNVALSGTGGISKEDAGRLILGGANTYTGGTTVKGGV
LQGSATSLQGSIVNNAEVAFDQDKTAGIYAGVMSGTGKLRKIGAGTLTLASANSYSGGTL
VDAGTLATATSGALGTGAVSIASGAALQFGGKADAGKLAIANQGTLRLQDGANAASATVA
NAAGAQVRIDLATTGASIGALGGAGDVVLGAKALTTGAVGSDSTISGAITGAGGSLVKVG
AGTLTLAGTASYSGETRVAAGTLKAGAANAFSAASNAVVASGATLDLAGFSQTVAGLANS
GTVALAGAAPGTTLTVKGNYVGNNGVLKLGTVLNGGAGPSDRLVIDGGAASGKTSVQIAN
IGGLGARTSGAGIEVVSARNGATTTAQTTKDAFVLAGGHVDAGAFEYRLHAGDASGGGEN
WYLRTEAEPGTPGNPGGTGLPTYRAEASLFAALPNQLRQSNLGMLASRSQRVGDDDVRGG
ASSTSGTDGSYRRAWGRLISTDMGIRQGGTVSPHSEGRLTGLQAGTDLWANPDWRAGIYV
GQLDGDARVRGVGSGLLNSATGRNDLRSQYLGLYGTFATEDGFYADAVLQAGRHRYTVQP
LLSGGVEGKGNSFLASIEVGKAFAIGSGGWSVEPQLQLIHQRLRLDDVSIPGALVQQDAD
SGWIGRAGVRIKGSFATGAGTLQPYVRLNVYRSAKGNDVARFVNPAAITPVGAPIGGTST
ELAAGFTLSVSQRTSLYGELGKQWASGGDARVGSSINAAAGVRVKW
NT seq
8421 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgcctacaagaccctctggaacgcagcgctcggtgcatgggtcgccgtgtgc
gaaacggcgcccgcacgcggcaagcgcagcggcgggcggcgtgcgtcgagccgcgcgagc
ctcgtggcgccgctcgtggccgtgcccgctttcctgctgagcggaacggcctgggcggcg
tgcacgctcacgggcaccacgctcgactgcgcgggcgtcacgcccggctgggtcggcgtg
gcggacggcggcacgatcaacaacacgggaaccattgccacgctcggcgatggcacctgg
gccatcaacgtcggctccaacgtcacggtcaacaacaccggcacgatccatggcacggcg
ggcgtggtgaccggcggcaactcggtgatcaacaacaacggcggcacgatcagcagtacc
gatcgcgcggtccaggtgaccggcggaccggtcacgctgaccaactcgaacggcggcgta
atcgaagggtccgcgggcgccttgctgtatgggggcggaacgatcgtcaacaccggcaac
agccgcatcaccagcaacggcaactacctgggcctcggcttcggcggaggcagtgcaaac
atcaccaacacggcgggctccacgatcgagggcatctacagcatctacggccaggccacc
gcgatcacgctcgacaacggtggcctcctgcgaggccacgtcgccctggacggtgggctg
gtgcagtgggtcacgcttcgcaccggcagccgcgttcagggcaacctcaccatcggcaac
cgcgcgggatcgacgctcaccctggccggcgcgggcacgcagatccattcgcaagcggtc
accggcgtcactgacttcggcggcgacctgatcaagaacgacagcggcgactggatcgtc
gaccgcgccatcggtccgcgaactgcaacagtcaacgggggggcgctgggcttcgcctcg
ggcggctccttcggcaccggcactgccctgagcctggccgcagcgggcacgatgctgcac
acggattcgggcactgccgtcgtcggcaacctgacaggcgtggcgggcagcatggtggcg
ctcgcggccggttcctcgctgaggatggccgacgacagcagcaccaccgtcgccagcgat
ttcagcggcgggggaacgctgatcaagagcggcatcggcgtgctcacgctcagcggcaac
aacagcgccttcaccggcagcttcacggcgaacgcgggcaccttgcaggctgcgagcgcg
caggccatcggcggcgcggcgctcggcatcggcggcgcggtcacgctctcgagcccgttc
gcgctcgcgttgaacaacgtcgacctcatctcgggcagcggcgtgctcgacgtgcagaca
ccgggcgcggtcagcttcggcggcgtggtctcgggcgcgggttcgctggacctgcgcggc
atcggcggcacggtctcgctgctgaacaacaacagctatgcgggcggcacgcgcctggcc
ggcagcaccgtcgtgctgggcagcaacaccgcgctgggcaccggcacggccgcgatcgag
ggcaacaccgcgctgtcgggcaatgcagcgctgacgctgggcaacgccttcgcgatcggc
aagtcgaacacgctgagcatttcgggcccggcactgacgctcgatggccagatctcgggt
gacggcgccatcgtgaagcagggcgtcgatgtgctcacgctgcgcggcgacaacagctac
agcggcggcaccacggtggccatgggcacgctgagcgtcagcaacaagagcggcagtgcc
acgggcacgggcgccgtgcaggtgcagtcgggcgcggcgctcgtgggcagcggcgccatc
gccggcccggtcaatgtggccgcgggagcccgcctgtcggtgggcaacggcggcgtggga
gcccttgccaccggcgcgctcacgctcgcggcaggctcgacgctcgagatggaaatgggc
aaggccggcaaggccggcggcgcgttcaacgatctgctcaacgtcaacggcgatctctcg
ctggcgggcacgctcgatctcgcccaatcggctggcggcaccttcggtgcggggatctac
cggctcatcaactacacgggcgcgctcaccgccaacgcgatgaccatcggcagtgcgccg
acgccgcttggatacctcgcgctgcagacgggcgtggccaaccagatcaacctggtcaac
accggcggcctcgcgctcaacatgtgggacggcaacaaagtcgcgaacttcaacaacggc
caggtcgaaggtggcagcggcacctggcgcgccggctcgcccggcgacaactggaccgat
gccaacggcatcgtcaacgcgggctggatccaggacggcctcgcggtcttcaccggcaag
gccggcacagtcgcggtggacaacacgggcgcaggtggcgcggtgcgcatcggcggcgcg
cagttcgcggtcgacggctacgtagtcaacggcgacccgctcgcgatcaacgcggcgaac
accacggtgcgcgtgggcgacggcaccgccgcgggcgcgggcatgacggcgaccatcaat
gcggccatcggcggcacgggcgggctggtcaaggacgacggcggcacgctggtgctgacc
ggcaacaacagctacatgggcggtacctcggtcaagggcggcatcctgcagatctcgggc
gatgccaacctcggcgcgatcggcacgggcctggcgctggacggcggcaccctgcgcatc
gccacgggttccacgccgttcttcagcatgcgcaatgtcgcgctcggcgccggcggcggc
accatcgacctgggcaacagcttcctcgagctgcgcggcgtcgtcagcggcagcggcctc
tttaccgtcaccggcaagggcggcagcctgagtctggtggcggccaacagctatagcggc
ggcacggtgctgaaggacggcgcgagcatcgtcgccagcgccggcggcgtgttcggcggc
ggcgcggtgcagcagcagggcgacggcacggtgctggccttcaccaacgcggcgagcgcc
ggcggcaacgactacatcgtgggacgtgccgcgaccgcggacaacggcaatgtgctgtcg
ttcgcccagaccaccacggcggccacttcgaagatcacggtcaatggcgggggctggcag
gcgccgggcgtgaacatcttgcggttcggcggcagttcgagcgccggtgcatcgaccatc
gtcaatgcgggcggtgggatcggcttcctggagaccgccagcgccgggacggcgacgatc
acgaacggcagcaacagcctgctcgtcttcggccagaaggccacggccggcagtgcgcag
atcgccaacacggccggcggccttgtgctctttgccgataccgcgacgggcacgaatgcc
tcggtcaccaacgccgcaggcgccacgctcgatgtgtcgggcgcgacgggcggcaagccc
gccgtcgaactcggctcgctcacgggcgcgggcgccgtggtgctgggcgccacgcagctc
gcgctcggtggcctgggcaacagcgacacgatctcgggcaccgtcagcgacaagggcagc
atcttcgcgcagccgggctcgggcacgggcggctcgatcgtcaaggtcggcgccggcacg
ctcacgctgagcggcgccaacagttacaccggcggcaccacggtggcggccggcacgctc
gccgtgaacaacgtcggcggcagcgcgaccggcacgggcgcggtgcaggtgcagtcgggc
gcgacgctcgcaggcatcggcagcatcgcgggcgcggtgagcgtgggcaagggcggccag
ttgtccgcaggcaacggtggcgccggcacgctgaccttgggcagcctgagtctcgccgat
ggcgcagtgctgaactacgacctgggccaggccggcgtggccggcggatcgctcaacgat
ttggtcaacgtcaacggcaacctgcaactggacggcacgctcaacgtggcggaatcgacc
ggcggcaagttcggcgcgggcctgtaccgcctcatcaactacaccggcacgctgaccgac
aacggcctggacatcggcactgcgccgaccgacgcgagcaagatgtccgtgcagacctcg
gtggcgaaccagatcaacctggtgaacagcaacgggctggtgctcaacctctgggacggc
gtcaactccggcaacttcaacgacggcaagatcgccggcggctctggcacctggcgtgcg
ggcgtgcccggcgacagctggaccgacgcgaatggaaccgccaacggcacctgggtgcag
ggcgggttcgcgatcttcgccggcaaggccggcacggtcacggtggacaacacgggcgcg
ggcggggcggtgcgcatcggtggtgcgcagttcgctgtcgatggatacaccatcgacggc
gcagcgctgacgatgaacgccccggtctcgatcattcgcgtgggcgacggcacggccgcg
ggcgccagcatgaccgcgaccatcaacgcggccatcacgggcgcgggcggtctcgtgaag
gatgacgtgggcacgctggtgctcggcggcagcaacagctacaccggcggcaccaccgtc
aagggcggcaccttgcagatcgcctccgacgccaacctcggtgcggccgcgggcggcctt
gcgctgcagggcggcgccacgctgcacgtgaccggcgacagcgtcagtgcgcgcgccgtg
agcctgggcgcgggcagcaacaccttcgacatcgacgcggtacgtaccgtggcgctgaac
ggcaccgcgagcggcgcgggcagcctgcgcaagaccggcgcgggcaccttgcggctcggt
gcggccaacagccatgcgggcggcaccttcgtcgatgccggcacgctggccaccgaggtc
accggtgcgctgggcagcggcgcggcgaccgtggccacgggcgcgacgctgcaactgggt
ggcggcttcgacgccggcaccaccgccatcggcaaccagggcaaggtgcgcttccaggac
aaatcgagcgccggcacatcgaccatcaccaacgccgcgggtggggtgctggcctttgcc
ggcgacgcctcggccgacaaggccacggtgatcaaccaggccggcgcacaggtgcgcatc
gaccaggcgaccaccggcgtgagcttcggcgcactcagcggcgcgggcgatgtcgtgctc
ggcgccaaggcgctcacgctgggcggcagcggcggcgacaacagcttgtcgggcaccgtc
agcggcaccggcggctcggtcgtcaagatcggcgccggcacgctcgtgctgacaggcgcc
aacacctacaccggcgccaccacggtggccgccggcacgctgagggtgaacaacaccagc
ggcagcggcacgggcaccggcagcgtgcaggtgcagtcgggcgccacgctcgcgggcagc
ggcagcatcgcgggcgcggtcaccatcgccaagggcggcatcctcgccgcgggcaacagc
ccgggcaccctgacgctcggcgcgctcacgctggccggcggctccacgctcaactacgaa
ctcggccaggccggcgtgcccggcggcgcgctcaacgacctgatcaacgtcacgggcaac
ctgcagctggacggcacgctgaacatcgcgcagtcggcggggggcaccttcggaccgggc
ctgtaccggctcatgagctacggcggcacgctgaccgacttcggcctggacatcggcacc
gcgccggccggcgccaagctggccgacctgcaggtgcagacctcggtggcgaaccaggtc
aacctggtcaaccgcgcgggcctgtcgctcaacttctgggacggcggcgacagcagcaaa
tacaacgacggccaggtggccggcggcaacggcacttggcgcctgggcagcccgcagcct
tcgcaggacggctggaccgacatggacggcaagctcaacgccaactgggcgcagaaccag
ttcgccgtgttcggcggcaaggccggcaccgtcacggtcgatgggggcggcggggcggtg
cgcatcgcgggtgtgcagttcgcggtcgacggctacacggtgcagggcgacggcatcacg
ctggacaacgccaactcggtcatccgcgtgggcgacggcacggccgccggcgcgaacatg
accgccacgatgaatgtcgcgctctcgggcacgggcggcatctcgaaggaagatgcgggc
cggctgatcctcggcggtgccaacacctacaccggcggtaccaccgtaaagggcggcgtg
ctgcagggcagcgccaccagcctgcagggcagcatcgtcaacaacgccgaggtcgcgttc
gaccaggacaagaccgccggcatctacgcgggcgtgatgagcggcaccggcaagctgcgc
aagatcggcgcgggcaccctgacgctggccagcgccaacagctacagcggcggcacgctg
gtcgatgcgggcacgctcgccaccgccaccagcggcgcactgggcacgggcgcggtgagc
atcgcctcgggcgcggcgctgcagttcggcggcaaggccgatgcgggcaagctcgccatc
gccaaccagggcacgctgcggctgcaggacggcgcgaatgccgccagcgccacggtggcc
aacgcggccggcgcgcaggtgcgcatcgacctcgccaccaccggcgcgagcatcggcgcg
ctcgggggcgcgggcgatgtggtgctcggcgccaaggcgctcaccaccggcgctgtcggc
agcgacagcacgatctcgggtgccatcaccggcgccggtggttcgctggtcaaggtcggc
gcgggcacgctcacgctcgccggcacggccagctacagcggcgagacgcgcgtggccgcg
ggcacgctcaaggccggcgcggccaacgccttcagcgctgcgtcgaacgccgtggtggcc
agcggcgccacgctcgacctcgcgggcttcagccagaccgtggcgggcctcgccaacagc
ggcaccgtggcactggcgggcgccgcgcccggcaccacgttgacggtcaagggcaactac
gtcggcaacaacggcgtgctgaagctgggcaccgtgctcaacggcggcgcggggccatcg
gaccggctggtgatcgatggcggtgcggccagcggcaagaccagtgtgcagatcgccaac
atcggcggcctgggtgcgcgtaccagcggcgcgggcatcgaggtggtgagcgcgcgcaac
ggcgcgaccaccaccgcgcagaccaccaaggacgccttcgtgctcgcaggcggccacgtc
gatgccggtgccttcgagtaccggctgcacgcgggcgacgcgagcggcgggggcgagaac
tggtacctgcgcaccgaggccgaaccgggcacgccgggcaatcctggcggcaccggcctg
ccgacctaccgcgccgaggcttcgctgttcgccgcgctgccgaaccagctgcgccagagc
aacctgggcatgctcgcgagccgcagccagcgcgtgggcgacgacgatgtgcgcggcggt
gccagcagcacttcgggcaccgacggcagctaccgccgcgcctggggccggctgatctcc
accgacatgggcatccgccagggcggcaccgtctcgccgcacagcgagggccgcctgacc
gggctgcaggccggcaccgacctgtgggccaacccggattggcgcgccggcatctatgtg
ggccagctcgacggcgacgcccgcgttcgcggcgtcggcagcggcctgctgaattccgcc
accggccgcaacgacctgcgcagccagtacctgggcctgtacggcaccttcgccaccgaa
gacggcttctatgccgacgcggtgctgcaggccggccgccaccgctacacggtgcaaccg
ctgctgagcggaggcgtcgagggcaagggcaacagctttctggcatcgatcgaagtgggc
aaggcgtttgcgatcggctcgggcggctggtcggtggaaccgcaactgcagttgatccac
cagcggctgcggctggacgacgtgtccatcccgggcgcgctcgtgcagcaggacgccgac
agcggctggatcggccgcgcgggcgtgcgcatcaagggcagcttcgcgacaggtgccggc
acgctgcagccgtatgtgcgcctgaacgtctatcgcagcgccaagggcaacgacgttgcg
cgcttcgtgaacccggcggcgatcacgccggtgggtgcgccgatcggcggcaccagcacc
gaattggccgcgggcttcacattgtcggtgagccagcgcacgagcctttacggcgaactg
ggcaagcagtgggcttcgggtggcgacgcgcgcgtaggcagctccatcaatgcggcggca
ggggtgcgggtgaagtggtga
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