Variovorax sp. EBFNA2: RZE79_31560
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Entry
RZE79_31560 CDS
T10564
Name
(GenBank) IS3 family transposase
Organism
vae Variovorax sp. EBFNA2
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Gene cluster
GFIT
Motif
Pfam:
HTH_21
rve_2
rve
HTH_Tnp_1
rve_3
HTH_28
HTH_23
DUF7660
Tektin
HTH_22
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
WPG41452
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Position
unnamed:complement(join(264677..265141,265143..266216))
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AA seq
512 aa
AA seq
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MYSYEDRIRAVELYIKLGKRVRPTIRQLGYPTKNSLKGWYNEYQQKLDLPAGYAGRRPKF
SQEQKAAAIEHYLTHDRCIAATMRALGHPCRGKLTAWIREALPEARRAIVGSTGRRRYSG
KLMQAGVMELCTREESAQAVADKFGVCRPTLYNWKNQLLGREAPASMKSTNQSPPSQERD
ELERQVESLRREVRQLRLEQDLLNKANELLKKGLGVDLQFLTNREKTLLIDALREHYGLP
ELLAQLDLARSSYFYHRARAAVGDKYLEVRQCITEIFESNHRCYGYRRLQASLTRQDVAI
SEKVVQRLMKQESLVVPKPRKRRYASYLGEISPAPENLINRDFQAAVPNEKWLTDITDFQ
IPAGKVYLSPIIDCFDGMVVSWTIGTSPDAELVNTMLDAAIVTVAETTDRPVVHSDRGGH
YRWPGWLSRMSDANFTRSMSRKACSPDNAACEGFFGRLKNELFYPRDWKNATIEQFIEAV
DSYIRWYNEKRIKISLGSLSPIEYRVSLGLAA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtattcctacgaagatcggattcgagccgttgagctctacatcaagctcggcaaacgc
gtcagacccactatccgtcagctaggttacccaacaaaaaattctctgaagggctggtac
aacgaataccagcagaagctcgacttgccagcgggctatgcgggccgcagacccaagttc
tcgcaggagcaaaaggcggcagctatcgagcattacctcactcacgaccgctgcattgct
gccaccatgagggcactgggccacccgtgcagagggaagctaaccgcctggattcgcgag
gcccttcctgaggccagaagggctatcgtcggcagtacggggcgacgaaggtattccggg
aagctgatgcaagcgggagtcatggagctttgcacgcgtgaggaaagtgcccaggctgta
gccgacaagttcggagtgtgccggccaacgctgtacaactggaagaaccaacttctggga
cgtgaggcacccgcatccatgaaaagcaccaatcaatctccgccgtcgcaagagcgcgac
gagctcgagcgccaggttgagtcgctgcgccgcgaagtcaggcaacttcgccttgagcag
gacctcttgaacaaggccaacgaactgttaaaaaaaggcttgggcgtcgacctgcagttc
ctgaccaaccgggagaagacactgctgattgacgccctcagggagcactatggcctgcca
gagctccttgcacagttggatcttgcgcgcagttcgtacttctatcatcgggcccgtgca
gcggtgggcgacaagtacctggaggtgcggcaatgcatcaccgaaatctttgagtcgaac
caccgctgctatggctaccgcaggctgcaagcttcgctcactagacaggacgtcgcgatc
tccgagaaggtcgtgcagcggttgatgaagcaggaaagcctggttgttccaaagcccagg
aagcgcaggtatgcgtcataccttggcgagatcagtccagcgcctgagaacctcatcaac
cgcgacttccaggccgcggtccccaacgagaaatggctcacggacatcacggatttccag
atcccggctggcaaggtgtacctctcgcccatcatcgactgcttcgatggaatggtcgtc
agctggaccattggaaccagtccggacgctgagctggtcaacacgatgctggatgcagcc
atcgtgacagtggccgaaacgactgaccggcctgtggttcactccgatcggggcggccac
taccgctggccaggttggctatcaagaatgagcgacgcgaacttcacccgctcgatgtct
cgcaaagcatgctcacctgataacgcagcttgcgaaggcttcttcggtcggctgaagaac
gagctgttctatcctcgagactggaagaacgccaccatcgagcaattcatcgaggcggtc
gactcgtacatccgctggtacaacgagaagcggatcaagatctctcttggctctctcagc
cctatcgaataccgggtgagccttggacttgcggcataa
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