KEGG   Variovorax sp. EBFNA2: RZE79_32175
Entry
RZE79_32175       CDS       T10564                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
vae  Variovorax sp. EBFNA2
Pathway
vae00061  Fatty acid biosynthesis
vae00071  Fatty acid degradation
vae01100  Metabolic pathways
vae01212  Fatty acid metabolism
vae02024  Quorum sensing
vae04146  Peroxisome
Module
vae_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vae00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RZE79_32175
   00071 Fatty acid degradation
    RZE79_32175
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    RZE79_32175
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RZE79_32175
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vae01004]
    RZE79_32175
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vae04147]
    RZE79_32175
Enzymes [BR:vae01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RZE79_32175
Lipid biosynthesis proteins [BR:vae01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   RZE79_32175
Exosome [BR:vae04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RZE79_32175
  Exosomal proteins of breast cancer cells
   RZE79_32175
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: WPG41563
LinkDB
Position
unnamed:complement(390370..392001)
AA seq 543 aa
MNNRPWLKWYPPQVPHDIEPLKDHQTLADFFNASFNHLGDRTAIRHENSEYSYSNLDSLS
LAIAAYLQTLGLSAGARVAVALPNSPHYVVAAIGVIRAGLVLVNVNPAYTAREFLLQVTD
AGAEASILLESQFDAVKDGLSQTQIRHLILCNLRTDLKPKPGDLLAHRDGTAVDMPAALS
LGMSAIYSPPNSANSDTAVLQYTGGTTGVSKGAMLSHESLLANTAQNFAWFQPALAEVPV
PVIACALPLYHIVSFITLLASIKLGGILLLISDPRDSAKMLSKLKEAPFHMLPGINTLFS
NLMNDPDFGTVDWSHLKIATAGGMSTQRPVAARWFERTGCAISEGYGLSETSGTVSCNPP
HGAIRQGTVGPPAPSTEVMILDEKFQALPLGEIGQIAVRGPQLFKGYWRREAETARFMTK
DGFFLTGDLGRIDEQGYLCISGREKEMMLVSGFNVYPSEIEAVAIEMELVLECAAVGIPD
EITGEAVKLVVVPRSDALTEESIRQHMKANLTAYKRPKVIEFREKLPRSAVGKLLRSSLG
APL
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgaacaatcgcccgtggttgaaatggtacccgcctcaagttcctcacgacatcgagccc
ttgaaggatcatcagacgctcgctgacttcttcaacgcctcgtttaaccatttaggcgat
cgtactgccatacgtcacgaaaatagtgagtacagctattcaaatctagactccttgagt
ctagcgatcgcggcctatttacagacccttggactcagcgcgggggcgagggttgctgtt
gcccttccaaattcaccgcactacgtcgtagcggcgattggtgttattcgggcgggattg
gtattggtcaacgtcaaccctgcctataccgctagggagttcctgttgcaagtcacggac
gccggtgccgaagcgtcgatactgctcgaaagtcaattcgatgcggtaaaagatggccta
tcccagacgcagattcgccatttgatcctctgcaatttacgcacggacttgaagccgaaa
ccaggcgaccttctcgcgcaccgcgacggcaccgctgttgatatgcctgcagcgctctct
ctcggcatgtcagcgatttactcgccacccaattcggccaatagcgacaccgcggtgctg
cagtacaccggcgggacgaccggggtttccaagggggcgatgctttcacacgaaagtcta
ttagcgaacacggctcaaaatttcgcttggtttcaacctgcattagcggaggtaccagtt
cccgttatcgcgtgcgcccttcccctgtatcacatagtttctttcataacgcttttggca
agtatcaagctgggaggaatcctccttctgatttcagaccctcgagattcagcaaaaatg
ttgtcgaagctgaaggaagcaccttttcatatgctgcccggcatcaatacgttattcagc
aatttgatgaatgacccggacttcggcacggttgattggagccacctgaagatcgcaacg
gctggcgggatgtccacccagcgtccggttgccgctcgctggttcgaaagaactggttgc
gccatcagcgaaggatacggactttccgagacttccggcactgtcagctgcaatcctcct
cacggcgccatccgccaaggaaccgtcggcccgccagcaccctcgacggaagtaatgatc
cttgacgagaaatttcaagccctgcccttgggagagatcggtcaaattgcagttcgcggg
ccgcaattatttaagggctattggcggcgcgaagcagaaactgctcgattcatgacgaaa
gatggttttttcctgacgggtgatcttggccgcattgatgaacagggctacctgtgcatt
tctggacgggaaaaagaaatgatgctcgtgagcgggttcaacgtttatcccagcgagatc
gaggctgtggctatcgagatggaactggtactcgagtgtgcggccgtcggcattcctgac
gaaatcactggagaagcggtgaagttggttgtcgtgccccgaagtgatgcactcaccgaa
gaatcaataaggcaacacatgaaggcgaatctcacggcttataaacgcccgaaggtaatc
gaatttcgggaaaaactccctcgatcagctgtcggaaaattgctgcgttcgtcgctgggt
gctccgctgtga

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