Variovorax sp. EBFNA2: RZE79_32420
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Entry
RZE79_32420 CDS
T10564
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
vae Variovorax sp. EBFNA2
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vae03000
]
RZE79_32420
Transcription factors [BR:
vae03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RZE79_32420
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
WPG41652
LinkDB
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Position
unnamed:complement(442971..443885)
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AA seq
304 aa
AA seq
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MHLHVDEEITFRRLEILLVFMETGNLTRAAEKLETSAVSVHRALHALESGLRCTLFRHEG
RTLHPTDAAQALAEVARDVLRTMSEGIRATREVAGYSSDRIRIGSLYSLTSRTVPQLIMG
MKLRKPELHTELVLGSNAHLLQKLRDGAIEAALMAIPEDASDVESEPLFEDDIQFAAPVG
SAYSSEKEIDLSKCAGERFVSLSEGFVTYSGFVDTFRIAGFTPDVVMKTDDIFSLMNLVS
GGVGYTLLPGRVRGVMPQNVQLIPLQPRYLMRQTIALNFLRTRERDPNLLSLLAVCRSTK
AELS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttcacgtcgacgaagaaattaccttccgccggctcgaaatcctcctggtcttc
atggagaccggcaatctcacccgcgccgccgaaaagcttgagaccagtgccgtcagcgtt
caccgcgccttgcatgcattggaatcgggactacgctgtaccttgttccggcatgagggc
cgaaccctgcatccgaccgatgcggcgcaggcactggcggaggtggcacgcgatgtcctt
cgcacaatgtccgagggcatccgcgccacgcgggaggtcgctggctattcatcggatcga
atccggatcggctcactctactcgctgaccagccgcacagtgccgcagctgatcatggga
atgaagctgcgcaagcccgagctgcacaccgagttggtgctcggctccaacgctcacctg
ctacaaaagctgcgcgacggcgccatcgaagcagcactcatggcaatccccgaggacgct
tcagacgttgaatccgagcccctgttcgaggacgacatccagtttgccgcaccggtgggg
tctgcctactcctcagaaaaggaaatcgacttgagcaaatgcgctggcgaacgctttgtg
agcctgagcgaaggcttcgtcacctacagcggctttgtcgatacatttcgcatcgccggc
ttcacgcccgatgtggtgatgaagacagacgatatcttctcgctgatgaacctggtgagc
ggcggcgtcggctacacgctgctgccagggcgggtgcgcggcgtcatgccgcagaacgtg
cagctgataccgctgcagccccgctatctgatgcgccagaccatcgcgctcaacttcctg
cgcacgcgcgaacgcgatcccaatctgctttcgctgctcgccgtgtgccgctcgaccaaa
gctgagctgagctga
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