Variovorax sp. EBFNA2: RZE79_32510
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Entry
RZE79_32510 CDS
T10564
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
vae Variovorax sp. EBFNA2
Pathway
vae03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RZE79_32510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vae03400
]
RZE79_32510
DNA repair and recombination proteins [BR:
vae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RZE79_32510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Npun_R1517
DDRGK
Motif
Other DBs
NCBI-ProteinID:
WPG41626
LinkDB
All DBs
Position
unnamed:457949..458875
Genome browser
AA seq
308 aa
AA seq
DB search
MATGSRTLWKGAITFGLVHIPVGLHTASIEQGVDFDWLDKRTMDPVGYKRINKKTGKEID
KENIVKGFEYEDGKYVVISPDEIEAVYPRTTQTIEIQRFIDANEIPFVYLERPYYVAPIN
KGQKVYALLREVLIKSGKVGLAKVVIATKQHLAVLVPSGKALVLNLLRWGDEVKTLEGLD
LPAAGVKGASVSAAEMKMAQQLVDDMSGKWDPEDFKDEFKHAVMKIVQKKVKAGDTETVI
QPEEEAPDEGSNVIDLSELLQRSLKAGSSGKAKAPATKKRSAKTAAKSAAKARKTAAKKT
HAAAKKVA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggcagtagaaccctctggaaaggcgcgatcaccttcggcctggtccatatc
cccgtgggcttgcacacggcgagcatcgagcaaggggtggacttcgactggttggacaag
cgcaccatggacccggtgggctacaagcgcatcaacaagaagacgggcaaggaaatcgac
aaggaaaacatcgtcaagggtttcgaatacgaggacggcaagtacgtcgtgatctcgccc
gatgagatcgaagccgtgtatccgcgcacgacccagacgatcgagatccagcgcttcatc
gacgccaacgagatccccttcgtctacctggagcgtccgtactatgtggcgcccatcaac
aagggacagaaggtctatgcgctgctgcgcgaagtgctgatcaagtccggcaaggtcggc
ctggccaaagtggtcatcgcgaccaagcagcacctggccgtgctggtgccgtccggcaag
gcgctggtgctcaacctgttgcgatggggtgacgaggtcaagacgctcgaaggtctcgac
cttcccgccgctggcgtcaagggtgccagcgtatcggccgcggaaatgaagatggcgcag
caactcgtggacgatatgtcgggcaaatgggatccggaggatttcaaggacgagttcaag
catgcggtgatgaaaatcgtccagaagaaggtgaaggcgggcgacaccgaaaccgtgatc
caaccggaagaggaagcgccggacgaaggctcgaacgtgatcgacctgtccgaacttctc
cagcgcagcctcaaggcaggcagttcgggcaaggcaaaggctcccgcgaccaagaagcgc
agcgccaagacggcggccaaatccgccgccaaggcgcgaaagactgctgcgaagaaaacg
cacgctgcggccaagaaggtcgcatag
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