Variovorax sp. EBFNA2: RZE79_33560
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Entry
RZE79_33560 CDS
T10564
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vae Variovorax sp. EBFNA2
Pathway
vae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RZE79_33560 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vae03019
]
RZE79_33560 (groL)
03110 Chaperones and folding catalysts [BR:
vae03110
]
RZE79_33560 (groL)
03029 Mitochondrial biogenesis [BR:
vae03029
]
RZE79_33560 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vae04147
]
RZE79_33560 (groL)
Enzymes [BR:
vae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RZE79_33560 (groL)
Messenger RNA biogenesis [BR:
vae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RZE79_33560 (groL)
Chaperones and folding catalysts [BR:
vae03110
]
Heat shock proteins
HSP60 / Chaperonin
RZE79_33560 (groL)
Mitochondrial biogenesis [BR:
vae03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RZE79_33560 (groL)
Exosome [BR:
vae04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RZE79_33560 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RZE79_33560 (groL)
Exosomal proteins of breast cancer cells
RZE79_33560 (groL)
Exosomal proteins of colorectal cancer cells
RZE79_33560 (groL)
Exosomal proteins of bladder cancer cells
RZE79_33560 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WPG41021
LinkDB
All DBs
Position
unnamed:complement(660434..662059)
Genome browser
AA seq
541 aa
AA seq
DB search
MTAKDVQFHDNARQRIVAGVNILADAVKVTLGPKGRNVLLERSYGAPVITKDGVSVAKEI
ELADKFENMGAQIVKQVASKTADVAGDGTTTATVLAQAIVQEGMKHVASGMNPMDLKRGI
DKATAAVLDELHKLSKPISTGKEIAQVAALSANSDDAIGKIIADAMEKVGKDGVITVEDG
KSLDNELDVVEGMQFDRGYLSPYFINDPEKQVAHLEDPLVLLHDKKISNIRELLPVLESA
AKAGKPLLIVAEEVEGEALATLVVNSMRGVLKVAAVKAPGFGDRRKAMLEDIAVLTGATV
ISDETGKQLDKATLEDLGHAKRIEVQKENTIIIDGGGDQQRIDARVKSIQAQIEQATSDY
DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKDRVDDALHATRAAVAEGIVPGGGVALL
RARAAISGLKGANTDQDAGIRIALRALEAPLRAIVTNAGVEPSVVVAKVLEGKGNHGYDA
ATGEYGDLVELGVVDPTKVTRTALQNAASIAGLILTTDATVAELPKPQKAPAVPAGGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaaagacgttcagtttcacgacaatgcccgccagcgcatcgtcgcgggcgtg
aacatccttgccgatgccgtgaaagtcaccctggggccgaagggccgcaacgtgctgctt
gagcgcagctacggcgcgccggtcatcacgaaagacggcgtgtcggtcgccaaggaaatc
gagcttgccgacaagttcgagaacatgggcgcgcagatcgtcaagcaggtcgcttccaag
accgccgacgtggcgggcgacggcaccacgaccgccacggtgctcgcgcaagcgatcgtg
caggagggcatgaagcatgtggcctcgggcatgaacccgatggacctcaagcgcggcatc
gacaaggccacggccgcggtgctcgacgagctgcacaagctctccaagcccatctccacc
ggcaaggaaatcgcgcaggtggccgcactgtccgccaactccgacgacgccatcggaaag
atcattgccgacgcgatggagaaggtcggcaaggacggcgtgatcaccgtggaagacggc
aagtcgctcgacaacgaactcgatgtggtcgagggcatgcagttcgaccgcggctacctg
agcccgtacttcatcaacgaccccgaaaagcaagtcgcgcatctcgaagacccgctcgtg
ctgctgcacgacaagaagatctccaacatccgcgagctgctgcctgtgctcgaaagcgcc
gccaaggctggcaagccgttgctgatcgtggccgaggaggtcgagggcgaggcactcgcg
acgctggtcgtgaactccatgcgcggcgtgctcaaggtggcggccgtgaaggcgcccggc
tttggcgatcgccgcaaggccatgctcgaggacatcgcggtgctcaccggtgccacggtg
atctccgacgaaacaggcaagcagctcgacaaggccacgctcgaggacctcggccacgcc
aagcgcatcgaggtgcagaaggagaacaccatcatcatcgatggcgggggcgaccagcag
cgcatcgatgcgcgcgtgaagtctatccaggcgcagatcgagcaggccaccagcgactac
gaccgcgagaagctgcaggagcgcgtggccaagctcgcgggcggcgtggcggtgatccgc
gtgggcgcggccacagaggtcgagatgaaggagaagaaagaccgcgtcgacgacgcgctg
cacgccacgcgtgcggcggtggccgagggcatcgtgcccggcggcggcgtggcgctgttg
cgcgcgcgtgccgcgatctccgggctcaagggcgccaacaccgaccaggacgccggcatc
cgtatcgcgctgcgtgcgctcgaagcaccgctgcgcgccatcgtcacgaacgcgggcgtg
gagccgtcggtggtggtggccaaggtgctcgaaggcaagggcaaccacgggtacgacgcc
gctacgggcgagtacggtgacctggtcgaactcggcgtggtcgacccgaccaaggtcacg
cgcaccgcgctgcagaacgccgcgtcgatcgcggggttgatcctcacgaccgacgcgacc
gtggcggagctgcccaagccgcagaaggcgcccgccgtgcccgccggcggcggcatggac
ttctga
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