Vibrio aestuarianus: MCL31_08815
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Entry
MCL31_08815 CDS
T11937
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vaes Vibrio aestuarianus
Pathway
vaes03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vaes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCL31_08815 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vaes03021
]
MCL31_08815 (rpoA)
03400 DNA repair and recombination proteins [BR:
vaes03400
]
MCL31_08815 (rpoA)
Enzymes [BR:
vaes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCL31_08815 (rpoA)
Transcription machinery [BR:
vaes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MCL31_08815 (rpoA)
DNA repair and recombination proteins [BR:
vaes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MCL31_08815 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WDS56949
LinkDB
All DBs
Position
1:1895911..1896903
Genome browser
AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGVQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEITNPEHVICHLTDDNAEIAMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATYSP
VDKIAYSVDAARVEQRTDLDKLVIDMETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtcttgttgatatcgaacagatcagc
acgacacacgcaaaagtaactcttgagccgttagagcgtggtttcggccatactctgggt
aatgcacttcgccgtattctattatcttcaatgccaggttgtgctgtcactgaagtagag
attgaaggcgtactacacgagtacagcactaaagaaggcgttcaagaagatatccttgag
atccttttaaaccttaagggtttagctgtacgcgttgccgaaggcaaagatgaagtgttc
attacgctgaacaaatcaggctcgggtcctgttgttgcaggtgacatcacccatgatggt
gatgtagagatcactaaccctgagcacgtgatttgtcacctaacggatgacaatgctgag
atcgctatgcgtatcaaagtagagcgtggtcgtggttatgttccagcttcagctcgtatc
catactgaagaagatgagcgtccaatcggtcgtctacttgtagatgcaacttacagccca
gtagacaaaattgcctactctgtagatgcagctcgtgtagaacagcgcactgatttagac
aagcttgttatcgatatggaaacgaacggtactctagaacctgaggaagctatccgtcgc
gcagcaactattcttgctgagcaattggatgcgttcgtagatcttcgtgatgtacgtgta
cctgaggagaaggaagagaagccagaattcgatccaatcctactgcgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtctgaaagcagaagcgattcactacatcggt
gatctagtacagcgcactgaggttgagctacttaaaacgccaaaccttggtaagaaatct
cttacagagattaaagacgtgcttgcatcacgtggtctatctttaggtatgcgcctagag
aactggccgccagcgtctatcgctgaagattaa
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