Vibrio alfacsensis: D1115_00135
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Entry
D1115_00135 CDS
T05841
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf00071
Fatty acid degradation
vaf00280
Valine, leucine and isoleucine degradation
vaf00310
Lysine degradation
vaf00362
Benzoate degradation
vaf00380
Tryptophan metabolism
vaf00410
beta-Alanine metabolism
vaf00640
Propanoate metabolism
vaf00650
Butanoate metabolism
vaf00907
Pinene, camphor and geraniol degradation
vaf00930
Caprolactam degradation
vaf01100
Metabolic pathways
vaf01110
Biosynthesis of secondary metabolites
vaf01120
Microbial metabolism in diverse environments
vaf01200
Carbon metabolism
vaf01212
Fatty acid metabolism
Module
vaf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
D1115_00135 (fadB)
00650 Butanoate metabolism
D1115_00135 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
D1115_00135 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
D1115_00135 (fadB)
00310 Lysine degradation
D1115_00135 (fadB)
00380 Tryptophan metabolism
D1115_00135 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
D1115_00135 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
D1115_00135 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
D1115_00135 (fadB)
00930 Caprolactam degradation
D1115_00135 (fadB)
Enzymes [BR:
vaf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
D1115_00135 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
D1115_00135 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
D1115_00135 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
D1115_00135 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AXX99934
UniProt:
A0ABM6YQM8
LinkDB
All DBs
Position
I:complement(25142..27343)
Genome browser
AA seq
733 aa
AA seq
DB search
MIYQAETLQVKEVHNGIAELSFCSPKSVNKLDLATLESLDKALDALIAHQGLKGLMLTSD
KNAFIVGADITEFLGLFAKTDAELDQWLQFANSIFNKLEDLPVPTISVLKGHTLGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEVITQGKACRADEALK
IGLLDAVVDTDALYESALQTLTSAINEKLDWQTRRKQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPMTAVITIEEGAHFTRNEALDIERKHFVKLAKSEEAKSLVGLFLNDQYIK
GLAKKSAKSASKETQRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQPSLDLGMTEASKL
LNKRLSRGRIDGFKMAGILASITPSLHYAGIDESDVIVEAVVENPKVKAAVLAEVEAHVG
NDTVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAQGFPERMGKQDRDAIDALFEANKYGQKNGSGFYNYTIDRKGK
PKKTFSEDILPVLADVCADKPFHDKERFDDQTIINRVMIPMINEVVLCLQEGIIATPQEA
DMALVYGLGFPPFRGGVFRYLDSVGIAEFVAMAKQYSELGAMYQVPQMLIDMAEKGHPVY
GKAFYGIQQQGSI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaagtacacaatggtattgcagagctt
agcttctgctctccaaaatccgtcaacaagctcgacctagcaacactagagtcactcgac
aaagcacttgatgccttgattgcgcatcaaggacttaagggcttgatgctcacctcagat
aaaaacgcgttcattgttggcgcggacatcaccgaattcttaggtctttttgccaagaca
gacgctgagctcgatcagtggctgcaatttgcgaacagcatcttcaataaactggaagac
ttgcctgtcccgaccatctcggtactaaaaggtcacacattaggtggcggttgtgagtgt
gtacttgcaactgacatgcgcattggtgacaagaccaccagcatcggtcttcctgaaact
aagttaggcattatgccgggctttggtggttgtgtccgtttaccacgcgtgatcggtgcc
gacagcgcaatggaagtgatcactcaaggtaaagcgtgtcgtgcggatgaagcattaaag
attggtcttcttgatgccgttgttgataccgacgctctttacgagtcagcgctacaaaca
ctgacatcggcaatcaacgaaaaactagactggcaaactcgtcgcaaacaaaagacatcg
cctctaacgctaagtaagcttgagtcaatgatgagctttactatggcgaaaggactagtg
gcacaaaaagccggtcctcactacccagccccaatgacagccgttattactattgaggaa
ggcgcgcactttacccgtaacgaagcactcgacattgaacgtaagcacttcgtaaaactg
gctaagtcggaggaagcaaaatcactggttggtctcttccttaacgaccaatacatcaaa
gggcttgctaaaaaatcagctaagtcagcgagtaaagagacacaacgtgcggcggtactt
ggtgcggggatcatgggtggcggtatcgcctaccaatctgcattaaaaggcgtaccggtg
ttaatgaaagacatcgcgcaaccgtcactcgatttagggatgacagaagcctctaaactg
ctgaataaacgcctatctcgtggtcgcattgacggctttaagatggctggcatcttagcg
tctatcacaccgagcctacattacgcgggcatcgatgaatcagacgtgattgttgaagcc
gtggttgaaaacccgaaagtaaaagcggcagttttagctgaagtggaagcgcatgtcggt
aacgataccgttatcacctcaaatacctcgacgattccaatcaatctattagcaaaatca
ctaaaacgcccagaaaacttctgtggtatgcacttcttcaacccagtgcatcgcatgcct
ctcgtcgagatcatccgtggcgaacacacttcagaagaaaccatcaatcgcgttgttgcc
tacgcagcgaaaatgggtaaatcaccaattgtcgtcaacgactgcccagggttctttgtt
aaccgcgttctattcccatactttggcggcttcagcatgctacttcgtgatggcgcagac
tttacgaaaatcgataaagtcatggagcgtaaatttggctggccaatgggaccggcgtac
ttgctcgacgtagtaggcattgatacagcccatcatgcacaagcggtgatggcgcaaggt
ttccctgagcgtatgggcaaacaagatcgtgacgcgatcgatgcactgttcgaagcgaac
aaatacggccagaaaaatggcagtggtttctacaactacaccattgatagaaaaggtaag
cctaagaaaaccttctctgaagatatcttgccagtactcgctgacgtttgtgccgataag
cctttccatgacaaagaacgctttgacgatcagaccatcatcaatcgagtgatgattcca
atgatcaatgaagtagtactgtgtctacaagagggcatcattgctactcctcaagaagcg
gatatggcactggtttacggccttggcttccctccattccgcggcggcgtattccgctac
ctagatagtgttggtattgctgaatttgttgccatggcaaaacagtactcagagcttggt
gccatgtaccaagtaccacagatgctgattgatatggcagagaaaggacatcccgtatat
ggaaaagccttttacggtatacaacagcaaggttctatctaa
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