Vibrio alfacsensis: D1115_00650
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Entry
D1115_00650 CDS
T05841
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vaf03016
]
D1115_00650 (trmA)
Enzymes [BR:
vaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
D1115_00650 (trmA)
Transfer RNA biogenesis [BR:
vaf03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
D1115_00650 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_25
MTS
Methyltransf_12
Cons_hypoth95
Methyltransf_31
Methyltransf_15
Methyltransf_11
DREV
PrmA
DUF6579
Motif
Other DBs
NCBI-ProteinID:
AXY00010
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Position
I:complement(121546..122655)
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AA seq
369 aa
AA seq
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MATLDVNPQRYQEQLAEKVERLTDMFAPYNVPELEVFESPEQHYRMRAEFRVWHEGEDLY
YIMFDQETREKYRVDQFPAASRLINDLMPLLVEAMKDNESLRRKLFQVDFLSTLSGEVLV
SLLYHRQLDDEWIENAKALKQRLNDEGFNLNIIGRARKMKIVLDRDYVIEKLDVNGQSYV
YQQVENSFTQPNGKVAEKMLEWAVDCTQESTGDLLELYCGNGNFSLALAQNFDRVLATEL
AKPSVVSAQYNIAANEIDNVQILRLSAEEFTQAIEGKREFRRLQDAGVDLKSYNCNTIFV
DPPRSGMDVDTCKMVQGYERIMYISCNPETLKENLDILCETHIVTRFALFDQFPYTHHME
AGVLLERKA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctactcttgatgtaaacccacaacgctaccaagaacaattggctgaaaaagtcgaa
cgtttgacagatatgttcgcgccatacaacgtgccagaacttgaagtgtttgaatcccca
gagcagcactaccgtatgcgtgctgagttccgcgtttggcatgagggtgaagatctttac
tacatcatgttcgaccaagaaactcgtgaaaaataccgcgttgaccaattccctgcggca
agtcgtctgatcaacgatttaatgccactattggttgaagcaatgaaagacaacgaatcg
ctacgccgcaagttgttccaagtggatttcctatcgacgttgagtggtgaggttctggtt
tctttgctttaccaccgtcagcttgatgatgaatggattgaaaacgcaaaagcactaaag
caacgtctaaatgatgaaggcttcaacctaaatatcatcggacgtgcacgtaaaatgaaa
atcgtactcgaccgcgactacgtgatcgagaagctagacgtgaatggccaaagctatgtt
taccaacaagttgaaaacagcttcacgcagccaaacggcaaagtagcagagaaaatgctg
gaatgggcagttgactgtacgcaagagagcacgggtgacctccttgagctttactgtggt
aacggcaacttctcgctcgcactggcacaaaacttcgaccgtgttctagccactgagcta
gccaagccatctgtggtttctgcacaatacaacattgctgcgaacgagattgataacgta
caaattctacgcctatcggctgaagagtttacccaagcgatcgaaggcaaacgtgaattc
cgtcgcctacaggatgcgggggtagatttgaagagctacaactgcaacaccatctttgtg
gatccaccacgctcgggtatggatgtcgacacttgtaagatggtgcaaggttacgagcgc
atcatgtacatctcttgcaatccagaaacactgaaagagaacttggacattctatgcgaa
acccacatcgtgacacgctttgcgttgtttgaccaattcccttatacgcatcacatggaa
gctggcgtgttactagagcgtaaagcataa
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