Vibrio alfacsensis: D1115_01580
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Entry
D1115_01580 CDS
T05841
Name
(GenBank) PadR family transcriptional regulator
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vaf
Vibrio alfacsensis
Pathway
vaf02024
Quorum sensing
vaf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D1115_01580
05111 Biofilm formation - Vibrio cholerae
D1115_01580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaf03000
]
D1115_01580
Transcription factors [BR:
vaf03000
]
Prokaryotic type
Helix-turn-helix
PadR family
D1115_01580
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Gene cluster
GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
HTH_34
Med27
Motif
Other DBs
NCBI-ProteinID:
AXY02289
UniProt:
A0A347UTW0
LinkDB
All DBs
Position
I:complement(302461..303000)
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AA seq
179 aa
AA seq
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MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAEKALVTCVLEPQ
EGKPDRKVYSITDAGRSALGEWFDQPTAHPTVRDEFSAKLIACAVQPAAPFRDQLSELVD
ESRKLVSHYKEIEAAYYATPSTLDKQARLERLTLRRNLMLREAWINWAEEVLTELEVIG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgtaatcttaaccgtacttagcactcgcgacgcaaccggttacgac
atcactaaagaattctcagctagcatcggttacttctggaaagcaagccaccaacaagtt
tatcgtgaacttaataaaatggcggaaaaagcgctggttacttgcgtactagaacctcaa
gaaggtaaacctgatcgtaaggtatattcaattaccgacgctgggcgtagtgcattaggt
gagtggttcgatcaaccaacggcacatccaaccgttcgtgatgaattttcagcaaaactt
attgcttgcgctgtacaaccagcagcacctttccgcgaccaactgtctgaactcgttgat
gaatcgcgcaaattggtttctcactacaaagaaatcgaagccgcttactacgcaacccca
tcaacactcgataaacaagctcgcctagagcgcctgactcttcgtcgtaacctgatgctg
cgtgaagcatggatcaattgggctgaagaagttttaactgaacttgaagtgattggttaa
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